Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30740
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 324 SKPSSVIHTTQGTLQTLQIKPEPNTLVNTQGQSCSDES 437
           + P+S+ + T+  ++T  I+PE  T V+T+     D S
Sbjct: 126 ASPTSIPYATRAEIKTESIQPE-TTKVDTREVQPHDAS 162


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 105 WCRSLQPSLPCQL 67
           W   L+P  PCQL
Sbjct: 178 WPEELEPGTPCQL 190


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 105 WCRSLQPSLPCQL 67
           W   L+P  PCQL
Sbjct: 178 WPEELEPGTPCQL 190


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 258 SVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEPNTLVN 407
           SV       Q+    +GN  L    S++  ++ G    L +KP+  +L+N
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLIN 59


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 105 WCRSLQPSLPCQL 67
           W   L+P  PCQL
Sbjct: 178 WPEELEPGTPCQL 190


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 258 SVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEPNTLVN 407
           SV       Q+    +GN  L    S++  ++ G    L +KP+  +L+N
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLIN 59


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 273 ASNIQSVQIPKGNVILVSKPSSVI 344
           ++ ++S+    GN IL +KPS V+
Sbjct: 358 SAKVRSMFNDSGNPILKAKPSEVV 381


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 159 PVSKSSRWPVDPSCQHRLWCRSLQPS 82
           P++   +W V+   + R W R  +P+
Sbjct: 28  PITGDEKWVVNNIKRKRWWSRPREPA 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,465
Number of Sequences: 438
Number of extensions: 3390
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)