Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30739
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18) 51 1e-06
SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45) 46 3e-05
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 46 3e-05
SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37) 43 3e-04
SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17) 42 7e-04
SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38) 42 7e-04
SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38) 42 7e-04
SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39) 40 0.002
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 40 0.003
SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36) 40 0.003
SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34) 40 0.003
SB_43675| Best HMM Match : K_tetra (HMM E-Value=0) 39 0.004
SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40) 36 0.048
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 35 0.063
SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.19
SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45) 32 0.44
SB_16378| Best HMM Match : DCX (HMM E-Value=0.7) 31 0.77
SB_42315| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 29 3.1
SB_20126| Best HMM Match : TSP_1 (HMM E-Value=0.0041) 29 4.1
SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06) 29 5.5
SB_35814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18) 28 9.5
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +1
Query: 406 DSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHIQKIIE 582
D AY+IDR P YF P+LNYLRHG++IID+ ++ GVLEEA FY I+ ++ I++ IE
Sbjct: 513 DEDDAYMIDRDPRYFFPVLNYLRHGKLIIDRDLHEEGVLEEAEFYSIEPLVKMIKERIE 571
>SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 58.4 bits (135), Expect = 6e-09
Identities = 39/99 (39%), Positives = 56/99 (56%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+TLNVGG +FTT STL +K+ SMLA MF+ N+ + DS G + IDR YF
Sbjct: 83 VTLNVGGHFFTTRLSTL-TKDQDSMLASMFSGRFNLDV------DSEGRFFIDRDGTYFV 135
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHIQ 570
+LNYLR + V + V EA +Y I+ ++ ++
Sbjct: 136 FLLNYLRDPSQLPPASVAMQ-VYREAQYYRIEGLMAMLE 173
>SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ LNVGG +TTS TL SML MF+ N+ A D+RG + IDR F
Sbjct: 9 VNLNVGGYVYTTSYKTLTRCRD-SMLGAMFSGRQNL------ARDTRGNFFIDRDGSLFR 61
Query: 454 PILNYLRHGEVII-DKYVNPRGVLEEAVFYGIDSMIPHIQKIIED 585
ILN+LR E+ + D + + + EA FY I+ +I +Q +D
Sbjct: 62 YILNFLRTSELCLPDSFDEFQQLSLEADFYQIEDLIKALQIYRQD 106
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
I LNVGG +FTT+ TL + P SML MF+ P DS G + IDR F
Sbjct: 277 IDLNVGGNHFTTTLLTLTTF-PDSMLGSMFSG------RIPVNRDSNGRFFIDRDGTLFR 329
Query: 454 PILNYLRHGEVIID-KYVNPRGVLEEAVFYGIDSMIPHIQKI 576
ILN+LR + + + + +L EA FY I+ +I I++I
Sbjct: 330 YILNFLRSNVLSLPANFKDYELLLNEADFYQIEPLIEEIKRI 371
>SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18)
Length = 307
Score = 50.8 bits (116), Expect = 1e-06
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Frame = +1
Query: 28 QNGKVLVVEDTLEAFKLEISNVFEIGGDFRLFTENGCEIVDVRVIRDDE---KLYVNCGD 198
+N + ED E+ E+ + D+R N E D++V + + K+Y +
Sbjct: 9 ENKLLASAEDIKESLNKEVKEL-----DWRSLG-NALEQQDIQVSKTTKASMKVYKSGDR 62
Query: 199 SKSCDTIESSLAKLSLNRCSEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNN 378
+ +C E + + L V ++LNVGG +T++ TL ++ P S+LA+M N
Sbjct: 63 TSTCLEFEDHVLEQQLLVFPSV---VSLNVGGYNYTSTAYTL-TQYPKSVLAQMC---NG 115
Query: 379 MYLMNPSATDSRGAYLIDRSPEYFEPILNYLRHGEVII-DKYVNPRGVLEEAVFYGIDSM 555
+ P D +G IDR F IL +LR G++ + + Y R +L EA FY ++ +
Sbjct: 116 II---PVPRDLKGQQFIDRDGATFRYILTFLRTGKLTVPEGYKYFRELLTEAEFYRLEPL 172
Query: 556 IPHIQ-KIIEDSKSYDSNHALTR 621
+ I+ KI E K+ + + R
Sbjct: 173 VELIKGKIKEGEKAKEKGYLRLR 195
>SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45)
Length = 623
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/103 (29%), Positives = 50/103 (48%)
Frame = +1
Query: 256 SEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDR 435
S+ + +T+NV GR F T R+TL ++ P ++L D Y + + Y DR
Sbjct: 34 SKTDERVTINVSGRRFETWRNTL-ARFPETLLG----SDEKDYFYDAETKE----YFFDR 84
Query: 436 SPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPH 564
P+ F +LNY R+G++ + +E F+GI + H
Sbjct: 85 DPDLFRHLLNYYRNGKLHYPRGECVSSFEDELEFFGISEDVVH 127
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ LN+GG++FT SR TL A + + + P A G Y I+R P++F
Sbjct: 18 VHLNIGGKHFTVSRRTLMDDSSTLFHALLSSPK-----IKPQAD---GCYFINRDPKHFR 69
Query: 454 PILNYLRHGEVIIDKYVNP-RGVLEEAVFYGIDSMIPHI 567
ILN++R G + + +L EA FY ++ H+
Sbjct: 70 YILNFIRTGIANLPEDAKSLNEILLEARFYPASGLLEHL 108
>SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/92 (35%), Positives = 44/92 (47%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ +NVGGR + T +STL S P + LA + + P S Y DR FE
Sbjct: 19 LVINVGGRRYETFQSTLASI-PDTRLAWIAGRPHE----TPEYDTSHNEYFFDRHSAIFE 73
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
ILNY R G++ + V EE F+GID
Sbjct: 74 DILNYYRTGKLHCPRGVCSAVFEEELSFWGID 105
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 45.2 bits (102), Expect = 6e-05
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 271 WITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYF 450
++ LNVGG T+ TL + +ML MF+ M ++ TDS G LIDR ++F
Sbjct: 18 YVKLNVGGSLHYTTLGTLTKHD--NMLRAMFS--GRMEVL----TDSDGWILIDRCGKHF 69
Query: 451 EPILNYLRHGEVIIDKYVNP-RGVLEEAVFYGIDSMIPHIQKIIEDSKSYDSNHALTRMD 627
ILN+LR G + + + + R + E+ +Y I+ ++ + ++ +K + + R+
Sbjct: 70 GTILNFLRDGSIPLPQCESELRELCTESKYYLIEQLVNQCEALL--AKKQQQHDPICRVP 127
Query: 628 VV 633
++
Sbjct: 128 LI 129
>SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/97 (34%), Positives = 44/97 (45%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ +NVGGR F T TL+ + P ++L + L + R Y IDR P F
Sbjct: 72 VVINVGGRRFITWEDTLR-RFPHTLLG-------SEELSSKFYDKERKEYFIDRDPHLFR 123
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPH 564
ILNY R+G++ EE FYGI S H
Sbjct: 124 YILNYYRNGKLHRSLEDCTESFEEELTFYGIRSKEVH 160
>SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+TLNVGG+ T STL S P + LA + + +M +P R + DR+P F
Sbjct: 19 VTLNVGGQKHETYVSTLASV-PDTRLA--WIAERSM--KDPRPLAQRREFFFDRNPSIFT 73
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
+LNY R G++ + V EE F+GID
Sbjct: 74 HVLNYYRTGKLHCPRDVCGPLFEEELAFWGID 105
>SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +1
Query: 217 IESSLAKLSLNRCSEVSDW-ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMN 393
+E AK S+ + D +T NV GR F T STL+ + P ++L Y N
Sbjct: 42 LEEVRAKASIAQRRSAGDKRVTFNVSGRRFETWESTLK-RFPNTVLGSKMIQ--RFYDTN 98
Query: 394 PSATDSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
Y IDR P F +LNY R+G + + P EE FYG+
Sbjct: 99 TKE------YFIDRDPYLFRFVLNYYRNGRLHCSQEDCPAAFEEELNFYGL 143
>SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37)
Length = 464
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/91 (34%), Positives = 46/91 (50%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+TLNV GR F T STL+ K P ++L +D N+Y + Y +DR P F
Sbjct: 70 VTLNVSGRRFCTWESTLK-KYPNTLLG---SDALNLYF-----DKEKREYFLDRDPHIFR 120
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
ILNY + G++ + +E +F+GI
Sbjct: 121 YILNYYKVGKLHLSYEDCFDSFHQELLFFGI 151
>SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17)
Length = 271
Score = 41.5 bits (93), Expect = 7e-04
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
I LNVGG+YF+TS TL ++ S+L R+F+ + D+ G Y IDR + F
Sbjct: 38 IELNVGGKYFSTSVFTL-TRIKDSLLGRIFSG-----RQSELDKDNSGKYFIDR--DGFL 89
Query: 454 PILNYLRHGEV-IIDKYVNPRGVLEEAVFYGIDSMIPHIQKI 576
IL+YLR + I +K+ + EA FY ++ + + ++
Sbjct: 90 YILDYLRSKALHIPEKFDEIERLKMEADFYELEDLRQRLDRL 131
>SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 404
Score = 41.5 bits (93), Expect = 7e-04
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = +1
Query: 214 TIESSLAKLSLNRCSEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMN 393
T++S+ LS ++ + IT+NV G+ F T TL+ K P ++L D M +
Sbjct: 8 TLQSTCQSLSNSKLKD-DRRITINVSGKKFVTWEKTLR-KHPSTLLG----SDRLMQFFD 61
Query: 394 PSATDSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
+++ + +DR P F ILN+ R G++ EE FYGI
Sbjct: 62 ----ETKREFFLDRDPHMFRYILNFYRCGKLHTSSEDCYSAFKEELGFYGI 108
>SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 347
Score = 41.5 bits (93), Expect = 7e-04
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = +1
Query: 214 TIESSLAKLSLNRCSEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMN 393
T++S+ LS ++ + IT+NV G+ F T TL+ K P ++L D M +
Sbjct: 8 TLQSTCQSLSNSKLKD-DRRITINVSGKKFVTWEKTLR-KHPSTLLG----SDRLMQFFD 61
Query: 394 PSATDSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
+++ + +DR P F ILN+ R G++ EE FYGI
Sbjct: 62 ----ETKREFFLDRDPHMFRYILNFYRCGKLHTSSEDCYSAFKEELGFYGI 108
>SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39)
Length = 218
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +1
Query: 268 DWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEY 447
D I +NVGG+ + STL++ P + LA + +MN + R DR P+
Sbjct: 14 DKIIINVGGKRHESYLSTLRNI-PDTRLAWLAES-----IMNKQSEQPRKEIFFDRHPDL 67
Query: 448 FEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSM 555
F ILNY R G++ + +E VF+GI+ M
Sbjct: 68 FAIILNYYRTGKLHAPRDCCGPLFEDELVFWGIEEM 103
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +1
Query: 256 SEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDR 435
S++++ IT+NVGG T STL++ P + L+ + + N + G Y DR
Sbjct: 14 SDLTERITINVGGFRHNTFMSTLKNI-PDTRLSWLAENHTNCVEYDQVL----GEYFFDR 68
Query: 436 SPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
P F +LNY R G++ V EE ++GI+
Sbjct: 69 HPRIFAEVLNYYRTGKLHCPGDVCSTLFQEELSYWGIN 106
>SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36)
Length = 407
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +1
Query: 268 DWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEY 447
D + +N GG+ F STL++ L L+++ +N + L + G Y DR P
Sbjct: 26 DRVVINCGGKRFEPYLSTLKNITDLP-LSKI--TENKIKL---DYDEESGEYFFDRHPAV 79
Query: 448 FEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
F +LNYL+ G++ + V +E ++GID
Sbjct: 80 FAQVLNYLQTGKLHCPRNVCGPLFEQELAYWGID 113
>SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34)
Length = 336
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/91 (32%), Positives = 42/91 (46%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
I LNVGGR F R+ L + P S+L + Y N + + DR P+ F
Sbjct: 71 IALNVGGRVFVV-RTHLLDRFPNSLLGSL--QIGQFYDKN------KQEFFFDRDPDVFR 121
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
ILNYLR G + + +L+E F+ I
Sbjct: 122 YILNYLRSGRLHVSDEECFNSLLDELEFFHI 152
>SB_43675| Best HMM Match : K_tetra (HMM E-Value=0)
Length = 794
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/94 (31%), Positives = 42/94 (44%)
Frame = +1
Query: 268 DWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEY 447
D I +N GG T RSTL++ P + L N NP + + DR P
Sbjct: 14 DIIIINCGGVRHETFRSTLRNF-PDTRLTWSVESTRN----NPDYDPEKNEFFFDRHPGV 68
Query: 448 FEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
F I+N+ R G++ V EE +F+GID
Sbjct: 69 FAQIMNFYRTGKLHAPHDVCGPLFQEELMFWGID 102
>SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 DSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLE-EAVFYGIDSMIPHIQKIIE 582
DSRG + IDR F IL+YLR+ ++ + + N R L EA + + M+ IQ+ +
Sbjct: 125 DSRGRFFIDRDGVLFRYILDYLRNCKLALPEGFNERERLTMEAEHFKLKGMVRAIQREKD 184
Query: 583 DSKSYD 600
+ KS D
Sbjct: 185 NIKSTD 190
>SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40)
Length = 440
Score = 35.5 bits (78), Expect = 0.048
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ LN+ GR F T +TL+ K P ++L D + Y + Y DR P +F
Sbjct: 46 VVLNISGRKFETWETTLE-KYPETLLGGKEKD--SFY------DKEKQEYFFDRDPVFFR 96
Query: 454 PILNYLRHGEV 486
+LNY R G++
Sbjct: 97 HVLNYYRKGKL 107
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 35.1 bits (77), Expect = 0.063
Identities = 30/91 (32%), Positives = 39/91 (42%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
I L VGGR F T L+ K P ++L + + +Y NP Y +R P F
Sbjct: 29 ILLKVGGRVFETWEENLR-KHPSTLLG---SKEKELYY-NPETK----MYTFERDPLMFR 79
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
ILNY R G + EE F+GI
Sbjct: 80 HILNYYRAGRLHYSCDYCADEFREELSFFGI 110
>SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 44/92 (47%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
ITLNVGG+ T ST+++ R++ N+ ++ + DR P+ F+
Sbjct: 12 ITLNVGGQKHETYLSTIRNYPD----TRLYWVVENVTKAIDYHSEKIELF-FDRHPKIFD 66
Query: 454 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
+LNY R G++ V EE ++GID
Sbjct: 67 QVLNYYRTGKLHCPNDVCGPLFEEELAYWGID 98
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 418 AYLIDRSPEYFEPILNYLRHG---EVIIDKYVNPRGVLEEAVFYGIDSMIPHIQKII 579
+Y +DR +F ILNYLR G E V + + +EA FY + +I I+ ++
Sbjct: 125 SYFLDRDGTHFRHILNYLRDGFLAETFPTDEVILKEIQQEANFYQLTGLIDSIEAML 181
>SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 33.1 bits (72), Expect = 0.25
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ LN+GG F ++ TL ++ + + Y +PS D +L DR P+ F
Sbjct: 4 VKLNIGGSEFVSTLQTLTRRQSWFSVT-------DAYKKSPSG-DYYTLFL-DRDPKVFR 54
Query: 454 PILNYLRHGEVII-DKYVNPRGVLEEAVFYGIDSMIPHIQK 573
+LN++R + + + + +L EA +Y I+ + I K
Sbjct: 55 HVLNFIRDERLSLPENFKEYELLLREATYYQIEGIREEIFK 95
>SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45)
Length = 727
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 394 PSATDSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGID 549
P S G Y DR P F +LNY R G++ V +E F+GID
Sbjct: 169 PHFDPSTGEYFFDRHPGVFANVLNYYRTGKLHCPLDVCGPLFEDELGFWGID 220
>SB_16378| Best HMM Match : DCX (HMM E-Value=0.7)
Length = 754
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 115 RLFTENGCEIVDVRVIRDDEKLYVNCGD 198
RLF ++G E+ ++ IR DE L V+CG+
Sbjct: 590 RLFKQSGQEVESIQDIRRDEMLCVSCGE 617
>SB_42315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 259 EVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRS 438
++SD ITLNV G F S LQ + P ++L Y +R Y DR
Sbjct: 11 KISDRITLNVSGAVFEVRVSILQ-RFPQTLL-------GCRYKRVQYYDSARNQYFFDRH 62
Query: 439 PEYFEPIL-NYLRHGEVIIDKYVNPRGVLEEAVFYGIDSM 555
+ FE IL Y G ++ V +E +F+ + +M
Sbjct: 63 RQAFEAILFFYQSGGRLMCPDNVPDTVFADEILFFQLPTM 102
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 106 GDFRLFTENGCEIVDVRVIRDDEKLYVNC-GDSKSCDTIESSLAKLSLNRCSE 261
GDF + TE C + D+ RD E+ N G + + +E LAKLSL +C+E
Sbjct: 897 GDFEV-TEKDC-MTDL-AWRDIEEAEANYKGFLNNIEEMEEKLAKLSLEKCNE 946
>SB_20126| Best HMM Match : TSP_1 (HMM E-Value=0.0041)
Length = 448
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 464 FRIGSKYSGLLSIKYAPLESVALGFIKYILLSSANILASIESGSLDCN 321
+ GS Y G + K+ ESV LG+ +S+A+ +A + +G+ N
Sbjct: 87 YSAGSPYGGYNAAKHRQDESVGLGYRNSPYVSTASQMAGLNNGATYMN 134
>SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1404
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 379 MYLMNPSATDSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMI 558
+Y NPS ++ G Y + + + P ++ +R + V P G + DS++
Sbjct: 276 IYDENPSP-EAYGEYFLMNPSKEYAPFIHTMREKIQLSKVSVPPEGCPS----FTEDSLL 330
Query: 559 PHIQKIIEDSKSYDS 603
H Q ++E ++YDS
Sbjct: 331 RHAQFLVEQIENYDS 345
>SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06)
Length = 1098
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 115 RLFTENGCEIVDVRVIRDDEKLYVNCGD 198
+LF +G +++ R I+ D +YV+CG+
Sbjct: 216 KLFLGDGEQVISPRQIKKDADIYVSCGE 243
>SB_35814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +1
Query: 160 IRDDEKLYVNCGDSKSCDTIESS 228
++D +++ V+ G+S+SC+++ES+
Sbjct: 292 VKDSDQMDVSTGNSRSCESVESA 314
>SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18)
Length = 427
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 427 IDRSPEYFEPILNYLRHGEV 486
IDR P+ F PILN++R E+
Sbjct: 405 IDRDPDAFVPILNFMRTKEL 424
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 454 VQNTLGFYLLSMLPSSLWHLGSLNTYYYH 368
V+NT GF L +++ + H G + TY++H
Sbjct: 1989 VKNTHGFPLCTLMVTCCVHDGEMLTYFFH 2017
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,314,771
Number of Sequences: 59808
Number of extensions: 418903
Number of successful extensions: 882
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -