Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30739
(768 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55000.2 68418.m06850 potassium channel tetramerisation domai... 71 1e-12
At5g55000.1 68418.m06849 potassium channel tetramerisation domai... 71 1e-12
At3g09030.1 68416.m01059 potassium channel tetramerisation domai... 55 6e-08
At4g30940.1 68417.m04393 potassium channel tetramerisation domai... 52 4e-07
At2g24240.1 68415.m02895 potassium channel tetramerisation domai... 46 4e-05
At5g41330.1 68418.m05023 potassium channel tetramerisation domai... 40 0.002
At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT... 34 0.091
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 34 0.091
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 34 0.091
At1g13080.1 68414.m01516 cytochrome P450 family protein identica... 29 2.6
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 4.5
At4g36280.1 68417.m05159 ATP-binding region, ATPase-like domain-... 28 6.0
At4g32500.1 68417.m04626 potassium channel protein, putative sim... 28 7.9
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote... 28 7.9
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 28 7.9
>At5g55000.2 68418.m06850 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 298
Score = 70.5 bits (165), Expect = 1e-12
Identities = 50/150 (33%), Positives = 81/150 (54%)
Frame = +1
Query: 256 SEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDR 435
S +S + LN+GG+ F T+ TL +EP SMLA MF+ + M +G IDR
Sbjct: 5 SNLSSMVRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAM-----CQESKKGYVFIDR 59
Query: 436 SPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHIQKIIEDSKSYDSNHAL 615
++F ILN+LR G + + +L EA +Y + + I+ ++ ++ L
Sbjct: 60 DGKHFRHILNWLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKDSRKEVGEVEAE--L 117
Query: 616 TRMDVVRALIKTSTSIELRFQGVNLAGADL 705
TR+D+++ I+T +RF+GVNL+G DL
Sbjct: 118 TRIDIIKC-IQTE---RVRFRGVNLSGIDL 143
>At5g55000.1 68418.m06849 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 290
Score = 70.5 bits (165), Expect = 1e-12
Identities = 50/150 (33%), Positives = 81/150 (54%)
Frame = +1
Query: 256 SEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDR 435
S +S + LN+GG+ F T+ TL +EP SMLA MF+ + M +G IDR
Sbjct: 5 SNLSSMVRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAM-----CQESKKGYVFIDR 59
Query: 436 SPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHIQKIIEDSKSYDSNHAL 615
++F ILN+LR G + + +L EA +Y + + I+ ++ ++ L
Sbjct: 60 DGKHFRHILNWLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKDSRKEVGEVEAE--L 117
Query: 616 TRMDVVRALIKTSTSIELRFQGVNLAGADL 705
TR+D+++ I+T +RF+GVNL+G DL
Sbjct: 118 TRIDIIKC-IQTE---RVRFRGVNLSGIDL 143
>At3g09030.1 68416.m01059 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 460
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 453
+ LNVGG F T+ ST+QS P S+LA ++ S + IDR PE F
Sbjct: 10 VKLNVGGEIFETNASTIQSSCPDSLLA----------ALSTSTSHGSNPVFIDRDPEIFA 59
Query: 454 PILNYLRHGEVIIDK--YVNPRGVLEEAVFYGIDSMI 558
ILN LR G + + + + +L+EA++YG++S++
Sbjct: 60 VILNLLRTGRLPANSSGVFSKQELLDEAMYYGVESLL 96
>At4g30940.1 68417.m04393 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +1
Query: 265 SDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPE 444
+D I NVGGR F T+ +TL + S +F D N L P G IDR+P+
Sbjct: 5 NDRIKFNVGGRIFETTATTLANAGRDSFFGALF--DENWNLSQP------GDLFIDRNPD 56
Query: 445 YFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
F +L+ LR G++ I + R + +EA+FYG+
Sbjct: 57 CFAVLLDLLRTGDLNIPPNIPERLLHKEAMFYGL 90
>At2g24240.1 68415.m02895 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +1
Query: 268 DWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEY 447
D I NVGGR F T+ +TL + S +F D+ N+ + S +DR+ +
Sbjct: 6 DRIKFNVGGRLFETTATTLANAGRDSFFGALFDDEWNLSPLEDSIL------FVDRNSDC 59
Query: 448 FEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 546
F +L+ LR G++ + + R + EA FYG+
Sbjct: 60 FAVLLDLLRTGDLNVPANIPERLLHREASFYGL 92
>At5g41330.1 68418.m05023 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 458
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 265 SDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPE 444
S+ +++NVGGR F T++ TL S+L+++ AT++ +DR P+
Sbjct: 10 SNVVSINVGGRIFQTTKQTLSLAGTDSLLSQL-------------ATET--TRFVDRDPD 54
Query: 445 YFEPILNYLRHGEV-IIDKYVNPRGVLEEAVFYGIDSMI 558
F +L LR G + + + R +++E+ +YGI+S +
Sbjct: 55 LFSVLLYILRTGNLPARSRAFDVRDLIDESRYYGIESFL 93
>At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT3)
identical to potassium channel [Arabidopsis thaliana]
gi|1100898|gb|AAA97865; Note: also identical to AKT3
[Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is
a truncated version of AKT2, PMID:10852932; member of
the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+
channel family, PMID:11500563; identical to cDNA
inward-rectifying K+ channel (AKT3) GI:1172219
Length = 802
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 34 GKVLVVEDTLEAFKLEISNVFEIGGDFRLFT-ENGCEIVDVRVIRDDEKLY 183
GK++++ +L+ K F G + T E+G EI + VIRD++KLY
Sbjct: 745 GKLILLPPSLDDLKKIAGEKFGFDGSETMVTNEDGAEIDSIEVIRDNDKLY 795
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 34.3 bits (75), Expect = 0.091
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 298 YFTTSRSTLQS-KEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFEPILNYLR 474
Y + T QS K LS+ + FA M+ S + S YL D SPE F+ ++N++
Sbjct: 356 YLSDHSLTFQSHKVILSLWSVAFA---KMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMY 412
Query: 475 HGEVIIDKYVN 507
GE+ ++ VN
Sbjct: 413 SGELNMEDTVN 423
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 34.3 bits (75), Expect = 0.091
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 298 YFTTSRSTLQS-KEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFEPILNYLR 474
Y + T QS K LS+ + FA M+ S + S YL D SPE F+ ++N++
Sbjct: 356 YLSDHSLTFQSHKVILSLWSVAFA---KMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMY 412
Query: 475 HGEVIIDKYVN 507
GE+ ++ VN
Sbjct: 413 SGELNMEDTVN 423
>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 502
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 434 LSIKYAPLESVALGFIKYILLSSANIL-ASIESGSLDC 324
LSIKY PL + LG + +++SS+ A +++ L+C
Sbjct: 58 LSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLEC 95
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 4 FVYLSHKKQNGKVLVVEDTLEAFKLEISNVFEIGGDFRLFTENGCEIVDV 153
F YLS+ NG +D L AF +N F F LF G E V +
Sbjct: 41 FSYLSNAILNGNWKDADDYLSAFTSPEANTFSRKMFFGLFKSGGSEAVKI 90
>At4g36280.1 68417.m05159 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 626
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 588 RIFYNLLNMRNH*IYTIKYSLF*NTSRVYIFIYYNFSM 475
R+ + +L +R+H Y ++YSL S +Y+ + NF +
Sbjct: 306 RLHHKILELRSHISYHLRYSLRAYASMLYLKKFKNFKI 343
>At4g32500.1 68417.m04626 potassium channel protein, putative
similar to potassium channel [Solanum tuberosum]
gi|1514649|emb|CAA60016; similar to AKT1 [Arabidopsis
thaliana] gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 880
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 31 NGKVLVVEDTLEAFKLEISNVFEIGGDFRLFTENGCEIVDVRVIRDDEKL 180
+GKV+ + D+LE +EI ++ + G EI D+R+IRD + L
Sbjct: 826 SGKVVKLPDSLEEL-IEIGEKKLGFVATKILSREGAEIDDIRIIRDGDFL 874
>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 - Oryza sativa,
PIR:A57676
Length = 1010
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 274 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNM 381
++ N+GG YFT S T S +S L R+ ++NN+
Sbjct: 262 LSFNMGGNYFTGSIPTTLSN--ISTLERLGMNENNL 295
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +1
Query: 7 VYLSH------KKQNGKVLVVEDTLEAFKLEISNVFEIGGDFRLFTENGCEIVDVRVIRD 168
VY SH K++ G VL V ++E + + +E+ +I+DV +I D
Sbjct: 759 VYFSHPGDSKEKRRRGIVLWVPRSIEELIRTAKEQLNVPEASCVLSEDEAKIIDVDLISD 818
Query: 169 DEKLYV 186
+KLY+
Sbjct: 819 GQKLYL 824
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,181,927
Number of Sequences: 28952
Number of extensions: 295537
Number of successful extensions: 777
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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