Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30738
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 35 0.056
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 34 0.098
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.23
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 32 0.39
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 0.91
At1g61080.1 68414.m06877 proline-rich family protein 30 1.2
At2g17550.1 68415.m02031 expressed protein 29 2.1
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 2.8
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 2.8
At3g51290.1 68416.m05614 proline-rich family protein 29 3.7
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 4.9
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 4.9
At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to hexoki... 28 4.9
At5g37600.1 68418.m04529 glutamine synthetase, putative similar ... 28 6.4
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 6.4
At5g24350.1 68418.m02870 expressed protein weak similarity to ne... 27 8.5
At4g23300.1 68417.m03358 protein kinase family protein contains ... 27 8.5
At4g00560.3 68417.m00079 methionine adenosyltransferase regulato... 27 8.5
At4g00560.2 68417.m00078 methionine adenosyltransferase regulato... 27 8.5
At4g00560.1 68417.m00077 methionine adenosyltransferase regulato... 27 8.5
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 8.5
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 8.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 8.5
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 34.7 bits (76), Expect = 0.056
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 248 KHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 412
+HQR P+ +P + PV +P +TS ++T + SGP SP+S N S+ S T
Sbjct: 618 RHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSASPSSANNSMFISHT 675
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 33.9 bits (74), Expect = 0.098
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 489 QGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 337
+G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V
Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +2
Query: 263 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSI 439
P PP SP P PV P+ P TS + T S E+ S + P+ D+ D
Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSEDIEAPSDS 867
Query: 440 NSSLTLVNSDTLSDQPWVVPEVEESMTS 523
N S +S S P PEVE + S
Sbjct: 868 NHSPVFKSSPAPS--PDSEPEVEAPVPS 893
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 31.9 bits (69), Expect = 0.39
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 53 APTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHG-TTSMTPTKASPSSTFKRS*RTWPA 229
APT + + P +N ++K HAT P + + G S+ A+ + +S P
Sbjct: 113 APTANAKAPGLNPSLVKDHATAPSPSANPPAALPGLNPSLVKENATAPAPSVKSPVALPI 172
Query: 230 RATMQVKHQRW-PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 391
VK P +P+ LP + P + + TL T+ PE +P N+
Sbjct: 173 LNPSTVKENATAPVASAKAPVALP--SINPSPVMKNETLPTTSKVPERNPTKKNV 225
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 158 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 337
++S++P+ +SPS + + P+ A P P LSP P P PL+SL
Sbjct: 24 SSSLSPSSSSPSLSPSPP-SSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSS-SPLSSL 81
Query: 338 TLTQTASGPETSPAS 382
+ + + S P +SP+S
Sbjct: 82 SPSLSPSPPSSSPSS 96
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 224 PARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP 376
P A M +KH P PP L P +P+ P P S P P
Sbjct: 462 PPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPP 512
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 468 SELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 340
+EL R +EL ++QV + V EE + + ++ PD V VR
Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 263 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 403
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 263 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 403
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +2
Query: 263 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 418
P PP P P P+ P T+ T T T+S P P S TWD
Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 187 RCFC--RCHRRSPMHVRLRN*LFHHQCRVEFH 98
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 269 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 400
PP P Y P +P V P VQP T T T P TSP + P
Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146
>At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to
hexokinase 2 [Arabidopsis thaliana] Swiss-Prot:P93834
Length = 502
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 199 VQEILKDMASQGDYASQASAVAQTA-GIIAHLSAGIPGDACAAANVINSYTDGVRSGNFA 375
V EILK A + D A+ + + Q A + + AG+ + + ++ SY D + SG+
Sbjct: 37 VIEILK--AFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDET 94
Query: 376 GFRQSL 393
GF +L
Sbjct: 95 GFFYAL 100
>At5g37600.1 68418.m04529 glutamine synthetase, putative similar to
glutamine synthetase, cytosolic isozyme (Glutamate--
ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899
Length = 356
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 409 HVGQNLNLINQLVTNPGQLRYSVGPALGCAGGGRIY 516
+ G N++ IN V PGQ + VGPA+G + I+
Sbjct: 181 YAGINISGINGEVM-PGQWEFQVGPAVGISAADEIW 215
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 278 LSPIYLPVSPVMPV 319
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At5g24350.1 68418.m02870 expressed protein weak similarity to
neuroblastoma-amplified protein [Homo sapiens] GI:4337460
Length = 2376
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 317 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVV 496
++PL ++ + + P + +P S TW + IL IN + L +D + +
Sbjct: 1726 LEPLQAVEILKRHFTLVLPPNGSYMHIPDSSTWQECLILLINFWIRL--ADEMQEVKSSN 1783
Query: 497 PEVEESMTSKP 529
P + E++T P
Sbjct: 1784 PSLVENLTLSP 1794
>At4g23300.1 68417.m03358 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 660
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 252 CLTCIVALAGHVLQDLLNVEDGDAFVGVIDVVPCT*DYGT-SFSIINVAW 106
C CI AG ++QD +N DA+ +D C Y SFS W
Sbjct: 88 CFNCIKGAAGWLIQDCVN--QTDAYYWALDPTLCLVRYSNISFSGSAAFW 135
>At4g00560.3 68417.m00079 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 253
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 421
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 422 T*ILSINSSLTLVN 463
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At4g00560.2 68417.m00078 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 201
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 421
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 422 T*ILSINSSLTLVN 463
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At4g00560.1 68417.m00077 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 327
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 421
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 422 T*ILSINSSLTLVN 463
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 88 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 237
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 88 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 237
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 471 VSELTRVSDELIDKIQVLSHVSEEGTERLSEA-GEVSGPDAVCVRVN 334
+SE +DKI L+ S E RL+EA E++ A+C R++
Sbjct: 138 ISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSRLS 184
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,845,603
Number of Sequences: 28952
Number of extensions: 294967
Number of successful extensions: 1214
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -