BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30737 (760 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical pr... 33 0.22 AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 32 0.38 Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.2 Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.2 Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 1.6 AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 30 1.6 AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical ... 29 2.7 Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.6 Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.6 Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 29 3.6 AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical ... 29 4.7 Z79602-4|CAI79200.1| 72|Caenorhabditis elegans Hypothetical pr... 28 6.3 Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 8.3 AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 28 8.3 >Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical protein T12D8.5 protein. Length = 135 Score = 33.1 bits (72), Expect = 0.22 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = +1 Query: 475 CRGRVSWRYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQ 651 CR + K++ + K + + L HN H +AP+ PE +E P+R+ ++ Sbjct: 49 CRIESETQSNKERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYMEAGQVPPMRKASR 107 >AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical protein F07B7.14 protein. Length = 401 Score = 32.3 bits (70), Expect = 0.38 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +2 Query: 509 KSSSQPRTA*SSTLMT*RITTLMPKRRNRNPNSSSKYETRIP*DERTNLST*RT*RPEPH 688 +SSSQP+ L ++T R P SSS+ + +P +E + RPEP Sbjct: 31 RSSSQPK----ENLPKENVSTWPASCRRPEPRSSSQPKENLP-EENISTWPASCRRPEPR 85 Query: 689 SRIKVKAQPRPKTISTALSN-RHP 757 S + K P + IST L++ R P Sbjct: 86 SSSQPKENPPKEKISTRLASCRRP 109 >Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical protein C04A11.4 protein. Length = 952 Score = 30.7 bits (66), Expect = 1.2 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +1 Query: 211 ICQLDEYCSPETNRC 255 IC LDEYC+ ETN C Sbjct: 444 ICDLDEYCNGETNDC 458 >Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical protein C04A11.4 protein. Length = 952 Score = 30.7 bits (66), Expect = 1.2 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +1 Query: 211 ICQLDEYCSPETNRC 255 IC LDEYC+ ETN C Sbjct: 444 ICDLDEYCNGETNDC 458 >Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical protein C09G5.6 protein. Length = 948 Score = 30.3 bits (65), Expect = 1.6 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = +1 Query: 517 QPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSD 696 +PA +R + YP P AP P + + NP P +T P N + + Q + Sbjct: 166 EPASSR-RPYP---PQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPR-VPYNPPQPN 220 Query: 697 KSQGATTPKDDK 732 ++ T P+D++ Sbjct: 221 YTRQPTYPEDNR 232 >AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical protein Y46E12BL.4 protein. Length = 466 Score = 30.3 bits (65), Expect = 1.6 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +1 Query: 547 PNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQS 693 P+ L HH+ H +P P + P P RT P +K SQS Sbjct: 314 PSSLQHHHHHRRSP---PLFHSPVYKPKPRSRTESPAALKAAAAAASQS 359 >AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical protein T11F1.6 protein. Length = 431 Score = 29.5 bits (63), Expect = 2.7 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = +1 Query: 76 VCSCENVHGALEITEREMSGFVCVLILAGVASAQITLDGIRCGQLICQLDEYCS-PETNR 252 + + EN+H +T EM GF+ + A LDG+ + +CQ S PE Sbjct: 295 IMNLENLHPDFCLTFHEMIGFLDAQVYFKNIHANYCLDGVSFSESLCQFFNMSSLPEKCT 354 Query: 253 CAPCNVVCNKTHHNY 297 NV N Y Sbjct: 355 YIYGNVEINAGDEEY 369 >Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 29.1 bits (62), Expect = 3.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +1 Query: 187 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 324 D C ++ C+ +E+ TN C P VVC+ +D G K+C Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364 >Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 29.1 bits (62), Expect = 3.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +1 Query: 187 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 324 D C ++ C+ +E+ TN C P VVC+ +D G K+C Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364 >Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical protein W02D9.3 protein. Length = 386 Score = 29.1 bits (62), Expect = 3.6 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +1 Query: 496 RYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDP 633 ++L + +KN K+ D P+ + P PKP + + +P+P Sbjct: 207 KFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEP 252 >AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical protein ZK616.8 protein. Length = 360 Score = 28.7 bits (61), Expect = 4.7 Identities = 10/35 (28%), Positives = 21/35 (60%) Frame = +3 Query: 579 RSAETETRTQARNTKPGSPKTNEPTSQREGLRDQN 683 + ++++T + +NT+ G P P+S +G D+N Sbjct: 176 KKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKN 210 >Z79602-4|CAI79200.1| 72|Caenorhabditis elegans Hypothetical protein K09E9.4 protein. Length = 72 Score = 28.3 bits (60), Expect = 6.3 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = +1 Query: 598 PELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPK 723 PE+++EI +PD + + ++K +T++S G + PK Sbjct: 27 PEIEVEINDPDAAKLAERMSDMKAHCDQTAESQNQPGPSPPK 68 >Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein F57C7.1a protein. Length = 1209 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 571 PHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKD 669 P +A KP+P K + P P ++ PL++ D Sbjct: 1086 PKPQAKKPEPPQKKVAKKPAPQQKKKAPLSILD 1118 >AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical protein C51F7.1 protein. Length = 947 Score = 27.9 bits (59), Expect = 8.3 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +1 Query: 529 NRVKQYPNDLTHHNP----HAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSD 696 N++ Y + HH P HA++ P RNP P T QP+ +T +S Sbjct: 677 NQILTYEDAPIHHGPTLLTHAQSLHV-PGTVARPRNPPPYESTFQPIFAVGPKTSSSPPP 735 Query: 697 KSQGATT 717 +SQ + T Sbjct: 736 QSQPSLT 742 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,678,144 Number of Sequences: 27780 Number of extensions: 335525 Number of successful extensions: 1130 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1034 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1128 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1809061256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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