Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30735
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 33 0.28
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 32 0.37
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 31 0.86
06_03_0636 + 22983898-22985043 29 2.6
08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492 29 3.5
04_04_1553 - 34363848-34366058,34369087-34370451 29 3.5
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 29 3.5
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 29 4.6
11_06_0690 + 26303733-26306540 28 6.0
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 28 6.0
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 28 6.0
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 6.0
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 28 6.0
02_05_0906 + 32662199-32662376,32662506-32662615,32662776-326628... 28 6.0
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 28 8.0
08_02_1422 - 26971803-26971900,26974083-26975061 28 8.0
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 28 8.0
03_05_0563 - 25651529-25651621,25651712-25651790,25651875-256519... 28 8.0
03_02_0918 + 12381662-12383118,12383249-12384707 28 8.0
01_01_0208 + 1780275-1781123 28 8.0
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Frame = +2
Query: 371 GRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSG-IAVEAPHKKGTPSQ--CHNCQLYGH 541
G GR + + + ++P G++ F +C+ + +A P K C C+ GH
Sbjct: 53 GAGRSKHPLRVPGMRP---GERCF----ICKAADHVAKVCPEKSLWEKNKICLLCRQRGH 105
Query: 542 SSRNC------HARPRCVKC-LGDHATALCARD-QKTATEPPSCVLCRTQGH 673
S +NC + + C C H+ + C + + T+ SC +C+ QGH
Sbjct: 106 SLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGH 157
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKC-LGDHATALCAR 616
C+NC+ GH +RNC P C C + H C +
Sbjct: 143 CNNCRKSGHLARNCPNEPVCNLCNVSGHLARECPK 177
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPAN 682
C+NC+ GH +R+C P C HA L + C C+ GH AN
Sbjct: 41 CNNCKRPGHFARDC---PNVALC---HACGLPGHIAAECSSKDLCWNCKEPGHMAN 90
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +2
Query: 455 VCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTA 631
+C G+ + + C NC+ GH + +C C C H C+
Sbjct: 59 LCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGICRNCGKSGHIARECSAPPMLP 118
Query: 632 TEPPSCVLCRTQGHPA 679
E C C GH A
Sbjct: 119 GEMRLCSNCYKPGHLA 134
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +2
Query: 488 PHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEPPSCVLCRT 664
P G C NC GH + C C C H C + P C LC
Sbjct: 115 PMLPGEMRLCSNCYKPGHLAAECTNEKACNNCRKSGHLARNCPNE-------PVCNLCNV 167
Query: 665 QGHPA 679
GH A
Sbjct: 168 SGHLA 172
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPR-------CVKCL-GDHATALCARDQKTATEPPSCVLCRTQG 670
C NC GH +R C A P C C H A C T +C CR G
Sbjct: 98 CRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAEC-------TNEKACNNCRKSG 150
Query: 671 HPA 679
H A
Sbjct: 151 HLA 153
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKCL-GDHATALCARDQKTATEP 640
C C GH + NC RC CL H + CA A +P
Sbjct: 230 CVRCLDKGHIASNCSGPVRCHSCLEAGHMSCFCATRPTKAHQP 272
>06_03_0636 + 22983898-22985043
Length = 381
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 493 MGGFDSDTREPTDGLCVKDFLT 428
+GG+D +T PTD + V DFLT
Sbjct: 137 VGGWDPETWAPTDSVLVYDFLT 158
>08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492
Length = 1141
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 77 KAAWDRVCLALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFH 235
K +W ++ LK + N RNL +Q ++Q P+ +R +S+ + R+ H
Sbjct: 116 KTSWHKIARELKDSQCHLQNLRNL--WVQYEIQLPNGNR-VSTDVEDHRLPHH 165
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 408 LSSLPPRVRKSLTHRPSVGSLVSLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVW 587
L S PR R L +V +L+ +S P AL + N +L ++ PD L++
Sbjct: 21 LRSCSPR-RAVLRRARAVHALLVVSSTPSSPAL--TTFLANQLLSLYARLSAVPDALALL 77
Query: 588 AITPRPSALA 617
TPRPS ++
Sbjct: 78 RSTPRPSVVS 87
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 202 REGPMVVGCLNLNLNAVREVTGIREIYIFGLKGQANSI 89
REG VG LN+N NA E+ RE+ I G G S+
Sbjct: 393 REG---VGYLNMNFNATIEIVTSREVKICGALGPCISL 427
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 509 SQCHNCQLYGHSSRNCHARP----RCVKC-LGDHATALCARDQKTATEPPSCVLCRTQGH 673
S+C+ C+ GH +R+C + C KC H + C +E C C+ GH
Sbjct: 924 SECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSE---CFKCKQPGH 980
>11_06_0690 + 26303733-26306540
Length = 935
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 488 PHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEP 640
P + +C C GH +C PRC +C + C D+ ++ P
Sbjct: 85 PIPRWLQGRCFCCLGLGHLKADCKGAPRCYRCWFSGYLERDCKFDRGPSSRP 136
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 428 GKKIFNTQTVCRLSG-IAVEAPHKKGTPSQCHNCQLYGHSSRNC 556
G+ + T C G +AV P +K C C L+GH+S+ C
Sbjct: 172 GETLLETCFNCGEEGHVAVNCPMEK-RKRPCFVCGLFGHNSKQC 214
>11_01_0179 -
1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 483 STAIPESLQTVCVLKIFLPSGVGWRATRTILYGSLPR--PVCIRCTEFTGRP 334
S A ++T+C+L LPSG+ TR + + R +C+ C +F+G P
Sbjct: 775 SLANLHKIRTLCILGSALPSGI----TREACFVTPQRLGQLCLECFKFSGLP 822
>08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2
Query: 634 RRGFLVASAEGRGVIAQTLN 575
RRG LV +++G+GV+ QT N
Sbjct: 996 RRGMLVRASDGKGVVYQTRN 1015
>08_01_0036 -
267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 140 RNLANGIQIKVQTPDDHRALSSYLR 214
+NLAN +Q ++Q PDD+ YLR
Sbjct: 637 QNLANELQSQIQPPDDNIMSIDYLR 661
>02_05_0906 +
32662199-32662376,32662506-32662615,32662776-32662894,
32662982-32663072
Length = 165
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 489 PIKKALLASAIT-VNCTGTLPVTVTRAPDV 575
P+K+ALL S V T PVTV RAP V
Sbjct: 133 PLKRALLGSVSNYVVNNATCPVTVVRAPTV 162
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEP 640
C NC GH C RC C H C + +P
Sbjct: 132 CFNCLGLGHQKSACPGSTRCYNCWYSGHIARNCPTSRAARAQP 174
>08_02_1422 - 26971803-26971900,26974083-26975061
Length = 358
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/98 (23%), Positives = 41/98 (41%)
Frame = +2
Query: 182 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 361
D+ + SS L + + H Y L E +V G K D+ + D P+ +
Sbjct: 117 DNGESWSSSLEQVPLP-HVYPLPVIEEFGIVPNG-GKHFDLAALVVDYRS---PMKCSYS 171
Query: 362 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGI 475
MH ++ V+ + P PE +K+ T+ + G+
Sbjct: 172 MHIYSSKDTNWRVIPMVDPYPEVRKVIATKVITIAEGV 209
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKCLG 589
C NC + GH RNC A +C G
Sbjct: 110 CFNCGMEGHWHRNCTAGDWTNRCYG 134
>03_05_0563 -
25651529-25651621,25651712-25651790,25651875-25651920,
25652001-25652264,25652361-25652484,25652727-25652780,
25653589-25653657,25653752-25654021
Length = 332
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 459 VGSLV---SLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVWAITPRPSALATKK 626
VGS V ++SKPPI+K L+S IT +T P ++S A R S AT K
Sbjct: 166 VGSTVQEGTVSKPPIQKYALSSHITPR------LTPEATPKIMSTSASPRRMSTTATPK 218
>03_02_0918 + 12381662-12383118,12383249-12384707
Length = 971
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Frame = +3
Query: 408 LSSLPPRVRKSLTHRPSVGSL--------VSLSKPPIKKALLASAITVNCTGTLPVTVTR 563
LS LP VR +++H G L + LS L + + +C G LP +
Sbjct: 525 LSDLPHLVRFNISHNQLSGDLPPGSFFDTIPLSSVSDNPGLCGAKLNSSCPGVLPKPIVL 584
Query: 564 APDVLS--VWAITPRPSALATKK 626
PD S + P P+ L KK
Sbjct: 585 NPDSSSDPLSQPEPTPNGLRHKK 607
>01_01_0208 + 1780275-1781123
Length = 282
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 450 RPSVGSLVSLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVWAIT-PRPSALATKK 626
RP+V S S PP ++A A A ++ VT+T V+A+T RP ++
Sbjct: 123 RPAVAPASSASPPPERRAARARAEALD-RARFSVTLTSEEIEEDVYAVTGARPRRRPRRR 181
Query: 627 PR 632
PR
Sbjct: 182 PR 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,222,208
Number of Sequences: 37544
Number of extensions: 455188
Number of successful extensions: 1650
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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