Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30735
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 93 2e-19
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 93 3e-19
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 92 6e-19
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 87 2e-17
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 85 1e-16
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 85 1e-16
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 84 1e-16
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 75 9e-14
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 75 9e-14
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 74 2e-13
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 73 4e-13
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 71 1e-12
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 71 1e-12
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 58 9e-09
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 56 3e-08
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 56 3e-08
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 48 9e-06
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 43 5e-04
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 36 0.039
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 36 0.039
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 36 0.039
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 33 0.28
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 32 0.85
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 30 2.6
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P... 30 2.6
AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p pro... 29 4.5
AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p pro... 29 4.5
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5... 29 4.5
AE014298-825|AAF46105.1| 362|Drosophila melanogaster CG6048-PA ... 29 4.5
AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-P... 29 4.5
AY058354-1|AAL13583.1| 550|Drosophila melanogaster GH12682p pro... 29 6.0
AE014134-1183|AAN10603.1| 708|Drosophila melanogaster CG10806-P... 29 6.0
AE014134-1182|AAF52449.2| 715|Drosophila melanogaster CG10806-P... 29 6.0
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 93.5 bits (222), Expect = 2e-19
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 15/243 (6%)
Frame = +2
Query: 2 ARATPSPRPVAQNKTQTPPPVILQEKAAW----DRVCLALKAKNINFTNARNLANGIQIK 169
A P+ + V + K PPP+ ++E++ V L +K + + I+++
Sbjct: 205 ATEQPNEKTVGEPKKTRPPPIFIREQSTNALVNKLVALIGDSKFHIIPLKKGNIHEIKLQ 264
Query: 170 VQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGI-----PKELDVELVKADLLEQ 334
+QT DHR ++ YL +++TY L+ + L+VV++GI P E+ +E +KA
Sbjct: 265 IQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEI-IEALKAKNFSA 323
Query: 335 GLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKK------IFNTQTVCRLSGIAVEAPHK 496
+N +++ + P + + L+P + K I+N Q + I VE PHK
Sbjct: 324 KTAINILNK-----DKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHK 377
Query: 497 KGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHP 676
+ P QC NCQ YGH+ C + CV C H TA C ++ K C C + H
Sbjct: 378 RINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNC-GEKHT 435
Query: 677 ANY 685
ANY
Sbjct: 436 ANY 438
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 93.1 bits (221), Expect = 3e-19
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 15/243 (6%)
Frame = +2
Query: 2 ARATPSPRPVAQNKTQTPPPVILQEKAAWDRVCLALKAKNINFTNARNLANG----IQIK 169
A P+ + V + K PPP+ ++E++ V + + + L G I+++
Sbjct: 49 ATEQPNEKTVGEPKKTRPPPIFIREQSTNALVNKLVDLIGDSKFHIIPLKKGNIHEIKLQ 108
Query: 170 VQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGI-----PKELDVELVKADLLEQ 334
+QT DHR ++ YL +++TY L+ + L+VV++GI P E+ +E +KA
Sbjct: 109 IQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEI-IEALKAKNFSA 167
Query: 335 GLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKK------IFNTQTVCRLSGIAVEAPHK 496
+N +++ + P + + L+P + K I+N Q + I VE PHK
Sbjct: 168 KTAINILNK-----DKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHK 221
Query: 497 KGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHP 676
+ P QC NCQ YGH+ C + CV C H TA C ++ K C C + H
Sbjct: 222 RINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNC-GEKHT 279
Query: 677 ANY 685
ANY
Sbjct: 280 ANY 282
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 92.3 bits (219), Expect = 6e-19
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Frame = +2
Query: 32 AQNKTQTPPPVILQEKAAWDRVCLALKA-KNI---NFTNARNLANGI-QIKVQTPDDHRA 196
A+ PPP++++ D V L +++ +NI AR +G+ ++ + R
Sbjct: 120 AKRAQSKPPPIVME---GVDDVYLMMQSIENIVDLEKIEARASMSGVLRLYAADANTFRT 176
Query: 197 LSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVH----RM 364
+ ++L E FH Y L+E+R RV ++G+ +K +L + G V +H R
Sbjct: 177 IVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLRRN 236
Query: 365 HTGRGR-EPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGH 541
G + P NM + + K+I + +C + + +E K+ QCH CQ GH
Sbjct: 237 EPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMR-VVIEPLRKRNAIVQCHRCQQIGH 295
Query: 542 SSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANY 685
+++ C CVKC G+H C R + E +C C Q HPANY
Sbjct: 296 TAKYCRKAHICVKCAGEHPAKDCTRPR---IELCTCYNCGGQ-HPANY 339
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 87.4 bits (207), Expect = 2e-17
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Frame = +2
Query: 101 LALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIR 280
L KA +FT L N I+I+ +T D H A+ + L + I H++ + + ++VIR
Sbjct: 656 LNYKAGVNSFTTKSELGNNIRIQAKTMDAHNAIQNVLLEANIPLHSHQPKSAKGFQIVIR 715
Query: 281 GIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVC 460
+ + + +++ L + G+ + M R P + V + P +G + +
Sbjct: 716 HLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLK 774
Query: 461 RLSGIAVEAPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTAT 634
L G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT C + +
Sbjct: 775 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 832
Query: 635 EPPSCVLCRTQGHPANY 685
P +C C H ++Y
Sbjct: 833 -PATCANC-NGSHVSSY 847
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 84.6 bits (200), Expect = 1e-16
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Frame = +2
Query: 101 LALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIR 280
L KA +FT L N I+I+ +T D ++A+ + L I H++ + + ++VIR
Sbjct: 579 LNYKAGVNSFTTKSELGNNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIR 638
Query: 281 GIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVC 460
+ + + +++ L + G+ + M R P + V + P +G + +
Sbjct: 639 HLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLK 697
Query: 461 RLSGIAVEAPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTAT 634
L G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT C + +
Sbjct: 698 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 755
Query: 635 EPPSCVLCRTQGHPANY 685
P +C C H ++Y
Sbjct: 756 -PATCANC-NGSHVSSY 770
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 84.6 bits (200), Expect = 1e-16
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Frame = +2
Query: 101 LALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIR 280
L KA +FT L N I+I+ +T D ++A+ + L I H++ + + ++VIR
Sbjct: 579 LNYKAGVNSFTTKSELGNNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIR 638
Query: 281 GIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVC 460
+ + + +++ L + G+ + M R P + V + P +G + +
Sbjct: 639 HLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLK 697
Query: 461 RLSGIAVEAPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTAT 634
L G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT C + +
Sbjct: 698 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 755
Query: 635 EPPSCVLCRTQGHPANY 685
P +C C H ++Y
Sbjct: 756 -PATCANC-NGSHVSSY 770
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Frame = +2
Query: 101 LALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIR 280
L KA +FT L N I+I+ +T D + A+ + L + I H++ + + ++VIR
Sbjct: 656 LNYKAGVNSFTTKSELGNNIRIQAKTMDAYNAIQNVLLEANIPLHSHQPKSAKGFQIVIR 715
Query: 281 GIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVC 460
+ + + +++ L + G+ + M R P + V + P +G + +
Sbjct: 716 HLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLIK 774
Query: 461 RLSGIAVEAPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTAT 634
L G V+ K+ + P+QCH CQ +GH+ C +C+KC HA+ C + +
Sbjct: 775 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL-- 832
Query: 635 EPPSCVLCRTQGHPANY 685
P +C C H ++Y
Sbjct: 833 -PATCANC-NGSHVSSY 847
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 74.9 bits (176), Expect = 9e-14
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 125 NFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDV 304
++T NG++I+ + + + L + T + ER RV+IR +
Sbjct: 517 SYTTRAIEGNGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPC 576
Query: 305 ELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGK--KIFNTQTVCRLSGIA 478
+ +LL+ G V M P M V + +G KI + + + +
Sbjct: 577 SWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVD 635
Query: 479 VEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
+E ++ P QC+ CQ + H+ +C PRC+KC G+H ++ C K T P +CV C
Sbjct: 636 IERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNC 692
Query: 659 RTQ 667
Q
Sbjct: 693 SGQ 695
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 74.9 bits (176), Expect = 9e-14
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 125 NFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDV 304
++T NG++I+ + + + L + T + ER RV+IR +
Sbjct: 495 SYTTRAIEGNGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPC 554
Query: 305 ELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGK--KIFNTQTVCRLSGIA 478
+ +LL+ G V M P M V + +G KI + + + +
Sbjct: 555 SWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVD 613
Query: 479 VEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
+E ++ P QC+ CQ + H+ +C PRC+KC G+H ++ C K T P +CV C
Sbjct: 614 IERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNC 670
Query: 659 RTQ 667
Q
Sbjct: 671 SGQ 673
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 74.1 bits (174), Expect = 2e-13
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 152 NGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLE 331
NG++I+ + + L T + ER RVVIR + + +LL+
Sbjct: 534 NGVRIQAKDMTAFNKIKEVLVANGFPLFTNQPKSERGFRVVIRHLHHSTPCSWIVEELLK 593
Query: 332 QGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 505
G V M P M V + +G KI + + + + +E ++
Sbjct: 594 LGFQARFVRNMTNPATGGPMRMFEVEIAMAKDGSHDKIISLKQIGG-QRVDIERKNRTRE 652
Query: 506 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
P QC+ CQ + H+ +C PRC+KC GDH ++ C + + T P +CV C
Sbjct: 653 PVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRST---PATCVNC 700
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 72.9 bits (171), Expect = 4e-13
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Frame = +2
Query: 152 NGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLE 331
NG++I+ + + + L T + ER RV+IR + + +LL+
Sbjct: 541 NGVRIQAKDMTAYNKIKEVLTANGFPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 600
Query: 332 QGLPVNSVHRMH---TGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKG 502
G M TG + + +V + + GK I ++ +L G V+ K
Sbjct: 601 LGFQARFARNMTNPATGGPMRMFEVEIVMAKDSSHGKII----SLKQLGGQRVDIERKNR 656
Query: 503 T--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
T P QC+ CQ + HS +C PRC+KC G H ++ C K T P +CV C
Sbjct: 657 TREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCVNC 707
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Frame = +2
Query: 125 NFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDV 304
++T NG++I+ + + + L + T + ER RV+IR +
Sbjct: 110 SYTTRAIEGNGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPC 169
Query: 305 ELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGK--KIFNTQTVCRLSGIA 478
+ +LL+ G V M P M V + +G KI + + + +
Sbjct: 170 SWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVD 228
Query: 479 VEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
+E ++ P QC+ CQ + H+ +C PRC+K G+H ++ C K T P +CV C
Sbjct: 229 IERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNC 285
Query: 659 RTQ 667
Q
Sbjct: 286 SGQ 288
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Frame = +2
Query: 125 NFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDV 304
++T NG++I+ + + + L + T + ER RV+IR +
Sbjct: 110 SYTTRAIEGNGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPC 169
Query: 305 ELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGK--KIFNTQTVCRLSGIA 478
+ +LL+ G V M P M V + +G KI + + + +
Sbjct: 170 SWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVD 228
Query: 479 VEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLC 658
+E ++ P QC+ CQ + H+ +C PRC+K G+H ++ C K T P +CV C
Sbjct: 229 IERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNC 285
Query: 659 RTQ 667
Q
Sbjct: 286 SGQ 288
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 58.4 bits (135), Expect = 9e-09
Identities = 30/71 (42%), Positives = 36/71 (50%)
Frame = +2
Query: 473 IAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCV 652
I VE PHK+ P QC NCQ YGH+ C P CV C H + C +++ A E C
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKCN 84
Query: 653 LCRTQGHPANY 685
C H ANY
Sbjct: 85 NC-GGNHTANY 94
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 56.4 bits (130), Expect = 3e-08
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Frame = +2
Query: 161 QIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQG- 337
+I PD R L K F + L+EE+ RVV++GI + ++ + G
Sbjct: 238 RIYTANPDAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGY 297
Query: 338 ---------------LPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSG 472
+ VN T + N+ + L+ P K+ + R
Sbjct: 298 EVLNIYCPRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR- 356
Query: 473 IAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCARD 619
+ VE ++ QC CQ++GHS C P C KC G H T ALC D
Sbjct: 357 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISD 407
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 56.4 bits (130), Expect = 3e-08
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Frame = +2
Query: 161 QIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQG- 337
+I PD R L K F + L+EE+ RVV++GI + ++ + G
Sbjct: 272 RIYTANPDAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGY 331
Query: 338 ---------------LPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSG 472
+ VN T + N+ + L+ P K+ + R
Sbjct: 332 EVLNIYCPRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR- 390
Query: 473 IAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCARD 619
+ VE ++ QC CQ++GHS C P C KC G H T ALC D
Sbjct: 391 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISD 441
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 48.4 bits (110), Expect = 9e-06
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 506 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANY 685
P+QCH CQ +GH+ C +C+KC HAT C + + P +C C H ++Y
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSY 57
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 506 PSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCAR 616
P +C +CQL GH+S++C P CV C L H C R
Sbjct: 201 PMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTR 238
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 512 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGH 673
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGH 106
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 512 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGH 673
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGH 106
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 512 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGH 673
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGH 106
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.5 bits (73), Expect = 0.28
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKCLGDHATAL-----CARDQKTATEPPSCVLCRTQGHPA 679
C NC GH R+C + C C G H T L + + ++T PP+ L R A
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPTQQLPRPSSRNA 523
Query: 680 N 682
+
Sbjct: 524 S 524
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 31.9 bits (69), Expect = 0.85
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 515 CHNCQLYGHSSRNCHARPRCVKCLGD 592
C C +GH ++ C A PRC+ C D
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSD 456
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 506 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCR 661
P +C C +GH + C + C+ C T D + T +C+ CR
Sbjct: 185 PLRCKKCLRFGHPTPICKSVETCINCSETKHT----NDGEKCTNEKNCLNCR 232
>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
protein.
Length = 2977
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 8 ATPSPRPVAQNKTQTPPPVILQEKA 82
ATP+P+P + K+ +PPP +Q +
Sbjct: 770 ATPAPQPTVRAKSPSPPPTTIQRSS 794
>AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 392 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 556
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p
protein.
Length = 640
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 392 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 556
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 529 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 586
>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 503 TPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSC 649
TPS+ CQ G S R CH R + G++ C T PSC
Sbjct: 101 TPSEIAMCQAKGQSERWCHNYVRVLHSYGENQLYACG----TNAFQPSC 145
>AE014298-825|AAF46105.1| 362|Drosophila melanogaster CG6048-PA
protein.
Length = 362
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -3
Query: 462 LQTVCVLKIFLPSGVGWRATRTILYGSLPRPVCIRCTEFTGRPCSNRSAFTSSTSNSLGI 283
L V +L IFLPSG+ TRT L RP R GR + A +T + +GI
Sbjct: 7 LLAVALLLIFLPSGLRGATTRTHLDTKAIRP---RFNADPGRIINGTEASLGATRHQVGI 63
>AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-PA
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 392 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 556
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AY058354-1|AAL13583.1| 550|Drosophila melanogaster GH12682p
protein.
Length = 550
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 516 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 608
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 477 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 507
>AE014134-1183|AAN10603.1| 708|Drosophila melanogaster CG10806-PB,
isoform B protein.
Length = 708
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 516 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 608
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 635 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 665
>AE014134-1182|AAF52449.2| 715|Drosophila melanogaster CG10806-PA,
isoform A protein.
Length = 715
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 516 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 608
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 642 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 672
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,389,298
Number of Sequences: 53049
Number of extensions: 724475
Number of successful extensions: 2463
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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