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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30731
         (426 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383...   111   3e-25
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288...   103   6e-23
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117...    96   9e-21
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195...    53   8e-08
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475           46   2e-05
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520     44   4e-05
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616...    38   0.003
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039...    38   0.003
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170...    32   0.17 
11_04_0381 - 16999529-16999778,16999855-17000102                       31   0.29 
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751     31   0.29 
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132...    29   1.6  
04_03_1035 - 21887562-21890030                                         29   1.6  
04_01_0363 + 4754650-4755912                                           29   2.1  
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833...    28   2.7  
04_04_1638 + 34974369-34974764                                         28   2.7  
06_03_0885 + 25677243-25678157,25681064-25681705                       28   3.6  
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421...    28   3.6  
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608...    28   3.6  
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631...    27   4.8  
11_04_0153 + 14159820-14162417                                         27   4.8  
09_04_0189 + 15438538-15438591,15438671-15438891,15438982-154392...    27   4.8  
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677...    27   4.8  
08_02_0960 + 23058393-23059739                                         27   6.3  
04_03_0141 + 11767781-11767880,11767953-11769262                       27   6.3  
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708...    27   6.3  
06_03_0889 + 25702777-25703439                                         27   8.3  

>03_01_0509 +
           3836284-3836547,3836927-3837157,3837253-3837423,
           3838379-3838522,3838640-3838819,3838926-3839151,
           3839326-3839439,3839541-3839627,3839711-3839754
          Length = 486

 Score =  111 bits (266), Expect = 3e-25
 Identities = 50/108 (46%), Positives = 71/108 (65%)
 Frame = +2

Query: 101 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 280
           MPP +  PRPY G S  ++   +  ++  S+   Y+KP+ + +G MQ+LYD +GKRYLD 
Sbjct: 51  MPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDC 110

Query: 281 FGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAA 424
           FGGIVTVS GHCHP +  A+ +Q  +L HTT +Y +  I E+ E LA+
Sbjct: 111 FGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALAS 158


>03_02_0936 -
           12528336-12528379,12528516-12528602,12528696-12528809,
           12528895-12529120,12529200-12529523,12529603-12529773,
           12529870-12530100,12530291-12530479,12531176-12531178
          Length = 462

 Score =  103 bits (247), Expect = 6e-23
 Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = +2

Query: 41  MANRGTKLCFDIVRTYSTAKMPPTDF--VPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 214
           +A RG       V T + A     DF  VP PY GPS  ++ + +  ++ PS+ + Y KP
Sbjct: 5   IARRGLSRLAAAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKP 64

Query: 215 VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPK 394
           + + +G MQ+L+D  G+RYLD F GI TV  GHCHP V  A+  Q   L H+T LY +  
Sbjct: 65  LNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNHA 124

Query: 395 IYEYVEQLAA 424
           I ++ E LA+
Sbjct: 125 IADFAEALAS 134


>05_05_0202 -
           23211342-23211385,23211493-23211579,23211666-23211779,
           23211886-23212111,23212222-23212401,23212511-23212654,
           23212818-23212979,23213093-23213296,23214109-23214156,
           23214601-23214846
          Length = 484

 Score = 96.3 bits (229), Expect = 9e-21
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
 Frame = +2

Query: 98  KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT-------QGHMQWLYDN 256
           KMPP D+ P PY GP  +++ + +  ++ PS+ + Y +P           + + ++L+D 
Sbjct: 44  KMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYHKYLFDE 103

Query: 257 DGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAA 424
           DG+RYLD FGGI TV  GHCHP V  A+ +Q   + H+T LY +  I ++ E LAA
Sbjct: 104 DGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEALAA 159


>03_05_0467 -
           24615243-24615384,24619166-24619450,24619516-24619596,
           24619807-24619904,24620038-24620190,24620705-24620760,
           24620844-24621003,24621416-24621646,24621795-24621903,
           24622642-24622799
          Length = 490

 Score = 53.2 bits (122), Expect = 8e-08
 Identities = 26/89 (29%), Positives = 46/89 (51%)
 Frame = +2

Query: 158 EQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAA 337
           E++  +    S  N +  PV+ ++G    + D +G +Y+D       V+ GHCHPKV  A
Sbjct: 40  EELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRA 99

Query: 338 LKDQLDVLWHTTNLYRHPKIYEYVEQLAA 424
           LK+Q + L  ++  + + K   + E L +
Sbjct: 100 LKEQAERLTLSSRAFYNDKFPIFAEYLTS 128


>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
          Length = 465

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +2

Query: 191 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 367
           I   Y +  V+L  G    LYD DG+ YLD+  GI   ++GH  P   AA+  Q   L H
Sbjct: 74  IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 133

Query: 368 TTNL-YRHPKI 397
            +N+ Y  P++
Sbjct: 134 ASNVQYTVPQV 144


>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
          Length = 448

 Score = 44.4 bits (100), Expect = 4e-05
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 367
           I   Y +  V+L  G    LYD DG+ YLD+  GI   ++GH  P   AA+  Q   L H
Sbjct: 78  IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 137

Query: 368 TTNL 379
            +N+
Sbjct: 138 ASNV 141


>08_01_0699 -
           6163662-6163680,6163865-6163943,6163979-6164048,
           6164151-6164266,6164656-6164734,6164831-6164921,
           6165006-6165084,6165161-6165248,6165371-6165454,
           6165544-6165591,6166118-6166192,6166286-6166362,
           6166460-6166548,6166711-6166749,6167133-6167206,
           6167496-6167588,6167820-6167917,6168100-6168172,
           6168322-6168406,6168513-6168634,6169307-6169414,
           6169537-6169608
          Length = 585

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 15/50 (30%), Positives = 31/50 (62%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL 361
           P+++ +    ++YD +GK+Y+D   G+ + ++G   P++  A  DQL+ L
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKL 171


>04_04_1143 +
           31202901-31203034,31203312-31203345,31203913-31203985,
           31204090-31204187,31204356-31204448,31205081-31205154,
           31205680-31205768,31205859-31205935,31206016-31206090,
           31206438-31206485,31206571-31206654,31206734-31206821,
           31206896-31206974,31207072-31207162,31207724-31207802,
           31208219-31208334,31208430-31208488,31210292-31210342,
           31211418-31211444,31211725-31211809,31211952-31212024,
           31212154-31212251,31212385-31212477,31212972-31213045,
           31213258-31213296,31213410-31213498,31213583-31213707,
           31213750-31213824,31214225-31214272,31214359-31214442,
           31214574-31214661,31214762-31214840,31214930-31215020,
           31215113-31215191,31215485-31215600,31215910-31215987
          Length = 960

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL 361
           P+++ +    ++YD DGK+YLD   G+   ++G   P++  A  +QL  L
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKL 560



 Score = 34.3 bits (75), Expect = 0.042
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 242 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL 361
           ++YD+ G +YLD   G+   ++G   P++  A  DQL+ L
Sbjct: 59  YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKL 98


>12_02_0248 +
           16413295-16414394,16416511-16416762,16416839-16417055,
           16417216-16417353,16417493-16417669,16417744-16417851,
           16417925-16418392,16418493-16418570,16418673-16418756
          Length = 873

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 179 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 328
           MPP  T    KPVL  +G  QW   ND    + +  GI+TV + H  P +
Sbjct: 432 MPPRPTRDEDKPVLTPKGDRQW-QANDFGGNIRVPTGILTVIIKHFFPGI 480


>11_04_0381 - 16999529-16999778,16999855-17000102
          Length = 165

 Score = 31.5 bits (68), Expect = 0.29
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 179 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 328
           MPP  T    KPV+  +G  QW   ND    + +  GI+TV + H  P +
Sbjct: 64  MPPRPTRDEDKPVMTPKGDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 112


>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
          Length = 478

 Score = 31.5 bits (68), Expect = 0.29
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 209 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 352
           +P++        ++D DG  Y+D  G      +GH    VNAAL + L
Sbjct: 85  QPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETL 132


>10_08_0374 -
           17312430-17312513,17312794-17313029,17313081-17313261,
           17313335-17313445,17313495-17313722,17313862-17313999,
           17314159-17314375,17314452-17314564,17314919-17314921
          Length = 436

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 179 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 328
           MPP  T    KPVL  +   QW   ND    + +  GI+TV + H  P +
Sbjct: 20  MPPRPTRDEDKPVLTPKRDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 68


>04_03_1035 - 21887562-21890030
          Length = 822

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 231 GTCSGYTTTTARDTWICSVESSPSP 305
           GTCS Y+   A D ++CS   + SP
Sbjct: 87  GTCSPYSAVVAGDGYLCSAAPTSSP 111


>04_01_0363 + 4754650-4755912
          Length = 420

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = -3

Query: 304 GDGDDSTEQIQXXXXXXXXXXXXXXLGEKHRLLIGVRD*RRHV---NSFHLFYLLVRRSR 134
           GDGDD                      EK ++  G R  RR     N+  +  L V R  
Sbjct: 135 GDGDDRRRGATEGGRQAADGDRDDLKNEKEKITEGERGHRRRERRPNAADMATLTVARWE 194

Query: 133 VRSGHEIRRRHFGR 92
            RSG E RRR  GR
Sbjct: 195 WRSGGEPRRRRGGR 208


>10_08_0547 -
           18682357-18682683,18682971-18683060,18683279-18683301,
           18683397-18683496,18683615-18683749
          Length = 224

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 336 PSKINSMYCGIRPTCTDIRKSM 401
           PSK++S++CG +  CT  +K++
Sbjct: 90  PSKLSSVFCGTQDKCTACKKTV 111


>04_04_1638 + 34974369-34974764
          Length = 131

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = +1

Query: 76  RQNVQHGQNAADGFRAQTVHGTFVPTSRTNERSLHAAFNHERL*EAGASH 225
           R    HG  A  G R       F P +    R  HAA   +R   A  SH
Sbjct: 61  RHQTSHGAVAGRGLRRNRNTSMFAPPAHGEIRGAHAASKRKRKSNAADSH 110


>06_03_0885 + 25677243-25678157,25681064-25681705
          Length = 518

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 179 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 93
           CK+L + +  GT+V   VWA      +WP
Sbjct: 387 CKVLGYDVPRGTQVLVNVWAIGRDPRYWP 415


>06_01_0587 -
           4211917-4212021,4212250-4212478,4213426-4213759,
           4215116-4215186,4215374-4215493,4216353-4216771,
           4216885-4217336,4217434-4217812
          Length = 702

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = -2

Query: 308 PRRR*RFHRTDPGISCRRCRITTACAPG*EAPASYRRS*LKAACKLLSFVLLVGTKVPCT 129
           PRRR R     P + CRR     +   G +A AS  RS  +AA        L   +VP  
Sbjct: 513 PRRRRRPAPRLPALRCRRQAPAGSGLSGVQAAASPSRSVRRAAASAAPSPSLAACQVPEA 572

Query: 128 VWARNP 111
             AR P
Sbjct: 573 PSARAP 578


>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
            6087354-6088391,6089733-6089925,6090326-6090375,
            6090470-6090744,6091114-6091180,6091189-6091278,
            6091301-6091381,6091435-6091593
          Length = 1414

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 180  M*TPFICSTCWYEGPVYGLG 121
            M T  ICSTC+YE  V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293


>12_02_0522 -
           19960092-19960595,19962737-19962880,19963042-19963131,
           19963215-19963320,19963400-19963574,19963849-19963951,
           19964382-19964636,19964726-19964803,19964908-19965000,
           19965091-19965222,19965898-19966002,19966127-19966201,
           19966284-19966340,19966419-19966532,19966613-19966756,
           19966886-19966969,19967071-19967164,19967244-19967369,
           19967507-19967580,19967672-19967875,19968234-19968388,
           19968860-19968947,19969505-19969730,19970235-19970286,
           19970766-19970958,19973221-19973314,19973744-19973788,
           19974874-19974896
          Length = 1210

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +1

Query: 124 QTVHGTFVPTSRTNERSLHAAFNHERL*EAGASHPGAHAVVIRQRRQEIPGSVR-WNRHR 300
           Q + G  +P     E          RL EAGA  P      +R RR   P S   W RH 
Sbjct: 147 QAMVGAVMPIGGVREGGQAEPAVPSRLPEAGALVPIHRLKSLRIRRSTPPSSSSWWRRHC 206

Query: 301 LRGPLS 318
            R PL+
Sbjct: 207 NRTPLT 212


>11_04_0153 + 14159820-14162417
          Length = 865

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 289 NRHRLRGPLSSESKCSPQRSTRCIV 363
           N HR RG L+  S  S QRSTR +V
Sbjct: 482 NGHRSRGGLADNSGGSSQRSTRPLV 506


>09_04_0189 +
           15438538-15438591,15438671-15438891,15438982-15439214,
           15439322-15439541,15440091-15440212,15441086-15441339,
           15441425-15441532,15441622-15441828,15441929-15442213,
           15442312-15442467
          Length = 619

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 284 GGIVTVSVGHCHPKVNAALKDQLDVLW 364
           GG+V    G+ H +V A   D++DV+W
Sbjct: 582 GGVVHFLEGYTHHEVGAIDVDRIDVVW 608


>02_05_0003 -
           24867053-24867145,24867264-24867437,24867673-24867735,
           24868108-24868198,24869579-24869673,24870471-24870668,
           24871475-24871648,24872335-24872439,24872645-24872737,
           24873688-24873690,24874776-24874844,24875208-24875265,
           24875810-24875918,24876603-24876714,24877992-24878204,
           24878214-24878546
          Length = 660

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 297 VTIPPNRSRYLLPSLSYNHCMCPWV 223
           V  PP     L  ++SY HC C W+
Sbjct: 397 VKTPPVPWLVLTDAISYGHCQCQWL 421


>08_02_0960 + 23058393-23059739
          Length = 448

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 304 RGPLSSESKCSPQRSTRCIVAYDQPVQTSENL*VRRTIS 420
           RGPLS  S+  P R + C+ ++  P  +  N  V  T++
Sbjct: 225 RGPLSLVSQLGPSRFSYCLTSFLSPEPSRLNFGVFATLN 263


>04_03_0141 + 11767781-11767880,11767953-11769262
          Length = 469

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
 Frame = +2

Query: 89  STAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPP---SITNAYKKPVLLTQGHMQWLYDND 259
           S+A+ PP  + P  +  P Y         Y  P   +I    +    L+ GH + L++N 
Sbjct: 351 SSARPPPPGYNPNAFFHPQYAYFGMQPNEYFNPVLGAINTLSESIQRLSTGH-EALHEN- 408

Query: 260 GKRYLDLFGGIVTVSVGHCHPKV 328
             R L    G +  SVG  H +V
Sbjct: 409 -VRGLRTTIGDLNASVGRLHTRV 430


>03_02_0283 -
           7078754-7078856,7079358-7079431,7079995-7080090,
           7080145-7080270,7080856-7080939,7081458-7081506,
           7081630-7081688,7081908-7081925,7082141-7082620
          Length = 362

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 100 NAADGFRAQTVHGTFVPTSRTNERSLHAAF--NHERL*EAGASHPGAHAVVI 249
           N      A   HG   P + ++  +  AA   NH R       +P AHAV +
Sbjct: 61  NPNPSHHATAAHGILYPVATSSAAAAAAAATANHRRAPAVAVGYPRAHAVAV 112


>06_03_0889 + 25702777-25703439
          Length = 220

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 179 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 93
           C++L + +  GT+V   VWA      +WP
Sbjct: 87  CRVLGYDVPRGTQVLVNVWAIGRDERYWP 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,581,362
Number of Sequences: 37544
Number of extensions: 310723
Number of successful extensions: 1005
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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