Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30731
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...   111   2e-25
U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical p...    50   5e-07
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    50   5e-07
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    43   1e-04
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   4.3  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    27   4.3  
Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical pr...    26   9.8  
AL021175-3|CAA15963.2|  467|Caenorhabditis elegans Hypothetical ...    26   9.8  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score =  111 bits (267), Expect = 2e-25
 Identities = 48/90 (53%), Positives = 67/90 (74%)
 Frame = +2

Query: 149 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 328
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60

Query: 329 NAALKDQLDVLWHTTNLYRHPKIYEYVEQL 418
           NAAL +Q   LWHTT++Y    IYEY E+L
Sbjct: 61  NAALTEQAQKLWHTTSIYHTEPIYEYAEKL 90


>U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical
           protein C16A3.10c protein.
          Length = 226

 Score = 50.4 bits (115), Expect = 5e-07
 Identities = 22/67 (32%), Positives = 38/67 (56%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 391
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  + + 
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99

Query: 392 KIYEYVE 412
            + EY E
Sbjct: 100 VLGEYEE 106


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 50.4 bits (115), Expect = 5e-07
 Identities = 22/67 (32%), Positives = 38/67 (56%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 391
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  + + 
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99

Query: 392 KIYEYVE 412
            + EY E
Sbjct: 100 VLGEYEE 106


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 352
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 352
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV  A+  QL
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 376
           PV L++G   +++D +GK+Y D       V+ GHCHPK+   LKD   V+    N
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 98  KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 214
           K+ P  + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 172 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 44
           SFH   L   R+R R     R R    + RSDDV A   S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 21  QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 155
           ++R  S+     ++ + ++S R  R K RRR    DR+RD R  K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 150 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 37
           W+ G + G+G  + GG+LA  L ++  S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173


>Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical
           protein K09A11.5 protein.
          Length = 650

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 310 PLSSESKCSPQRSTRCIVAYDQP 378
           PL +   CS   ST C++AY  P
Sbjct: 564 PLQNFGVCSNWASTHCMIAYQNP 586


>AL021175-3|CAA15963.2|  467|Caenorhabditis elegans Hypothetical
           protein Y6E2A.4 protein.
          Length = 467

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 295 HRLRGPLSSESKCSPQRSTRCIVAYDQPVQTSENL*VRR 411
           H  + P+ S+   +PQ +   I  + + ++ SEN  +R+
Sbjct: 220 HTTKNPIPSKIIVTPQENDEAITKFHESMKNSENKIIRK 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,297,522
Number of Sequences: 27780
Number of extensions: 260137
Number of successful extensions: 834
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)