Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30729
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042197-1|AAH42197.1|  465|Homo sapiens major facilitator super...    41   0.005
BC030542-1|AAH30542.1|  332|Homo sapiens MFSD1 protein protein.        41   0.005
AK024215-1|BAB14852.1|  465|Homo sapiens protein ( Homo sapiens ...    41   0.005
AB014732-1|BAB20269.1|  466|Homo sapiens SMAP-4 protein.               41   0.005

>BC042197-1|AAH42197.1|  465|Homo sapiens major facilitator
           superfamily domain containing 1 protein.
          Length = 465

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 561 VIILSASMTCFVSLLCGIILGWMDYRAEKILNRQEESMNEEPFHLKDIMHF 713
           + ++   +TC +SL+C + L ++D RAE+IL++ E+    E   L D+  F
Sbjct: 213 ITLMIGGITCILSLICALALAYLDQRAERILHK-EQGKTGEVIKLTDVKDF 262


>BC030542-1|AAH30542.1|  332|Homo sapiens MFSD1 protein protein.
          Length = 332

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 561 VIILSASMTCFVSLLCGIILGWMDYRAEKILNRQEESMNEEPFHLKDIMHF 713
           + ++   +TC +SL+C + L ++D RAE+IL++ E+    E   L D+  F
Sbjct: 116 ITLMIGGVTCILSLICALALAYLDQRAERILHK-EQGKTGEVIKLTDVKDF 165


>AK024215-1|BAB14852.1|  465|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14153 fis, clone NT2RM1000092, weakly similar to
           MULTIDRUG RESISTANCE PROTEIN 2. ).
          Length = 465

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 561 VIILSASMTCFVSLLCGIILGWMDYRAEKILNRQEESMNEEPFHLKDIMHF 713
           + ++   +TC +SL+C + L ++D RAE+IL++ E+    E   L D+  F
Sbjct: 213 ITLMIGGVTCILSLICALALAYLDQRAERILHK-EQGKTGEVIKLTDVKDF 262


>AB014732-1|BAB20269.1|  466|Homo sapiens SMAP-4 protein.
          Length = 466

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 561 VIILSASMTCFVSLLCGIILGWMDYRAEKILNRQEESMNEEPFHLKDIMHF 713
           + ++   +TC +SL+C + L ++D RAE+IL++ E+    E   L D+  F
Sbjct: 213 ITLMIGGITCILSLICALALAYLDQRAERILHK-EQGKTGEVIKLTDVKDF 262


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,766,496
Number of Sequences: 237096
Number of extensions: 1791401
Number of successful extensions: 2632
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)