Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30727
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 261 IFLLSLFTGHIFKILPGLPFPTSFTI*PPRLWS--VALTF 148
           + LL +FT H   I+  + + +++ I  P +W   + LTF
Sbjct: 235 LILLLMFTSHFIFIVVSIFYMSAYLISNPIMWDRVMLLTF 274


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
          variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 4  YPDSDFSDEDQSPL 45
          Y D +FSD++ SPL
Sbjct: 11 YSDDNFSDDESSPL 24


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
          variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 4  YPDSDFSDEDQSPL 45
          Y D +FSD++ SPL
Sbjct: 11 YSDDNFSDDESSPL 24


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
          CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 4  YPDSDFSDEDQSPL 45
          Y D +FSD++ SPL
Sbjct: 11 YSDDNFSDDESSPL 24


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
          CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 4  YPDSDFSDEDQSPL 45
          Y D +FSD++ SPL
Sbjct: 11 YSDDNFSDDESSPL 24


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 67  ADHLRKVTNKLNNGQLLELYGLF 135
           A HL+K T  +N   L +L+G F
Sbjct: 410 AQHLQKTTTFMNYTDLHDLWGEF 432


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 254 SLASSLGISLRFFQASH 204
           SLA S+G+ L  F A+H
Sbjct: 801 SLAHSVGVFLTIFNAAH 817


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 490 GLTALHWAADRNAI 531
           GL   H+AADRN+I
Sbjct: 16  GLFVPHFAADRNSI 29


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 589 GQTALHYAVSCGHVESTKILT 651
           G T    A  CG VES   +T
Sbjct: 924 GSTGTRRATGCGRVESVAEVT 944


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 264 NIFLLSLFTGHIFKILPGLPFPTS 193
           N F+    T H  +++ GLP PTS
Sbjct: 232 NGFMQEQSTHHQGQLVVGLPAPTS 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,297
Number of Sequences: 336
Number of extensions: 3687
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)