Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30727
(683 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomy... 75 1e-14
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 51 1e-07
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 46 7e-06
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 43 5e-05
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 39 6e-04
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 37 0.003
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 35 0.010
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 35 0.013
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 33 0.051
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 28 1.4
SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|c... 27 2.5
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 27 3.3
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 3.3
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.3
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 26 4.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.4
SPAC3A12.09c |||urease accessory protein UreD |Schizosaccharomyc... 26 4.4
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 26 5.8
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 7.7
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 25 7.7
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 25 7.7
>SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 74.5 bits (175), Expect = 1e-14
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 43 LDSLFNKAADHLRKVTNKLNNGQLLELYGLFKQGTEGQCNTPKPGWLDGKGRRKWEAWKN 222
+ S F +AA ++++ N+ +LL+LY LFKQ T G NT KPG LD KG+ KW AW+
Sbjct: 1 MSSTFEQAAADVKELKETPNSDELLKLYALFKQATVGDNNTEKPGLLDLKGKFKWNAWEE 60
Query: 223 LKDMPSEEAKEKYIALL 273
LK E+A +YI+ +
Sbjct: 61 LKGKSKEDAASEYISFV 77
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 51.2 bits (117), Expect = 1e-07
Identities = 31/82 (37%), Positives = 42/82 (51%)
Frame = +1
Query: 436 VKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAV 615
V+ L K PEL +KD G T LH AA I + +S P++ D G T LH+A+
Sbjct: 123 VQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFAL 182
Query: 616 SCGHVESTKILTKAGATLLEDD 681
+ GH + L +AGA L D
Sbjct: 183 AEGHPDVGVELVRAGADTLRKD 204
Score = 33.1 bits (72), Expect = 0.038
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 397 SLLDAAREDCGERVKELLIKK-PELKYEKDEDGLTALHWAADRNAINALSAAL-SGGCPI 570
SL A E+C E E I+ P D+D T LHWA +N + L
Sbjct: 5 SLGKAIEENCPEEYVEQAIQNDPNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKP 64
Query: 571 DAVDECGQTALHYAVS 618
D DE G T L +++
Sbjct: 65 DEKDEAGWTPLMISIN 80
Score = 30.7 bits (66), Expect = 0.20
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 448 LIKKPELKY-EKDEDGLTALHWAADRNAI-NALSAALSGGCPIDAV--DECGQTALHYAV 615
L+K+P +K EKDE G T L + + ++ + + L +D GQT LHYA
Sbjct: 56 LLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVIEELINRSDVDPTITTRGGQTCLHYAA 115
Query: 616 SCGHVESTKILTKAGATLL 672
G + ++L L+
Sbjct: 116 GKGRLSIVQLLCDKAPELI 134
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 568 IDAVDECGQTALHYAVSCGHVESTKILTK 654
++AVD+ +T LH+A S G V + L K
Sbjct: 30 LNAVDDDKRTPLHWACSVGKVNTIYFLLK 58
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 45.6 bits (103), Expect = 7e-06
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 400 LLDAAREDCGERVKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALS--GGCPID 573
L+ A R E + E++ K P+ +DE+G + LH A+ I + + I+
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVIN 65
Query: 574 AVDECGQTALHYAVSCGHVESTKILTKAG 660
A +E G TA+H+A GH E K+L +AG
Sbjct: 66 AQNESGNTAMHWAALNGHAEICKLLLEAG 94
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 42.7 bits (96), Expect = 5e-05
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 397 SLLDAAREDCGERVKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALSGGCPIDA 576
SL AA + + VK L+ + DE G TALHWAA I L G ++A
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNA 62
Query: 577 VDECGQTA-LHYAVSCGHVESTKILTKAGA-TLLED 678
+ Q A +H+A G V++ L + GA LL+D
Sbjct: 63 IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKD 98
Score = 33.1 bits (72), Expect = 0.038
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 478 KDEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKA 657
+D+ T L WA+ + L G + A DE T LH+++ G+++ K++ K
Sbjct: 130 RDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKE 189
Query: 658 G 660
G
Sbjct: 190 G 190
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 502 LHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAV 615
+HWAA R ++ + + G D+ G LH AV
Sbjct: 72 IHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAV 109
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 481 DEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTAL 603
DEDG TALHWAA + + A L G + AV+ QT+L
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSL 274
Score = 33.5 bits (73), Expect = 0.029
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 577 VDECGQTALHYAVSCGHVESTKILTKAGATLL 672
+DE G TALH+A + G++E L +AGA ++
Sbjct: 233 IDEDGHTALHWAAAMGNLEMMHALLQAGANVV 264
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 577 VDECGQTALHYAVSCGHVESTKILTKAGATL 669
+D+ G T+LH+A S GH+E K+L +A A +
Sbjct: 244 IDDDGHTSLHWACSMGHIEMIKLLLRANADI 274
Score = 32.7 bits (71), Expect = 0.051
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = +1
Query: 370 EPDLVHNELSLLDAAREDCGERVKELLIKKP---ELKYEKDEDGLTALHWAADRNAINAL 540
E L E SLLD R+ L P ++ D+DG T+LHWA I +
Sbjct: 205 EAPLDKYEESLLDFFLHPEEGRIPSFLYSPPPDFQVNSVIDDDGHTSLHWACSMGHIEMI 264
Query: 541 SAALSGGCPIDAVDECGQTALHYAV 615
L I + QT L +V
Sbjct: 265 KLLLRANADIGVCNRLSQTPLMRSV 289
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 35.1 bits (77), Expect = 0.010
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 511 AADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKAGATL 669
AA + + L G +A DE G T +H AVS GH + KIL + G +
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDI 63
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 34.7 bits (76), Expect = 0.013
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 481 DEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKAG 660
+E G + LH A NA + + GC ++ D G T LHYA H + L G
Sbjct: 859 NESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNG 918
Query: 661 A 663
A
Sbjct: 919 A 919
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 32.7 bits (71), Expect = 0.051
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 472 YEKDEDGLTALHWAADRNAINALSAALSGGCPIDA-VDECGQTALHYAVSCGHVESTKIL 648
Y +D LT++ + +AL A LS +D +DE G ALH+A + + + L
Sbjct: 317 YHTSKDILTSIFLDVNFADSSALEAKLSDSLDLDVPIDELGHAALHWAAAVAKMPLLQAL 376
Query: 649 TKAGATLL 672
GA L
Sbjct: 377 IHKGANPL 384
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Frame = +1
Query: 223 LKDMPSEEAKEKYIALLKKYDPDWS----GTPQKT------NIDTKETWVAVSSMRYSP 369
L+D ++ +E+ +++K +DPD G P KT + DTKE+ + RY P
Sbjct: 67 LRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGP 125
>SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 959
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 DEDQSPLDSLFNKAADHLRKVTNKLNNG 108
DED +D+ + ADH+R +T +++G
Sbjct: 290 DEDVDGIDTAYRVVADHVRTLTFAISDG 317
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 3.3
Identities = 24/105 (22%), Positives = 47/105 (44%)
Frame = +1
Query: 145 TEGQCNTPKPGWLDGKGRRKWEAWKNLKDMPSEEAKEKYIALLKKYDPDWSGTPQKTNID 324
T G C+ KP W K R+ + ++ +E +++ + +D D+ N
Sbjct: 256 THGMCSRQKPTWF--KARKAY-----IRSQSTETSEDDDSS---SFDDDYQ------NYL 299
Query: 325 TKETWVAVSSMRYSPEPDLVHNELSLLDAAREDCGERVKELLIKK 459
+E W+A SS+ + H ++L + R+D KE +++K
Sbjct: 300 KQEPWLAHSSVNSLKDVAKFHCNITLDKSKRDDFASLEKEPILQK 344
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 205 WEAWKNL---KDMPSEEAKEKYIALLKKYDPDWSGTPQKTNIDTK 330
WE + L KD S++ KE Y L + + PD QK + K
Sbjct: 7 WELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEK 51
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 329 LVSIFVF*GVPDQSGSYF----FNKAIYFSLASSLGISLRFFQASHFLRPL 189
++S+FV G+ DQ+ +Y N+ ++ +++ + R F+A H L PL
Sbjct: 256 IISVFVNKGLVDQAAAYLKNSNLNERNLPTIYTTVWLLQRLFEAHHSLDPL 306
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 565 PIDAVDECGQTALHYAVSCGHVESTKILTKAGATLLED 678
PI+ VD+ + L A CGH K L + GA D
Sbjct: 78 PINQVDQFDYSPLVLASLCGHEPVVKFLLENGALCERD 115
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 260 YFSLASSLGISLRFFQASHFLRPLPSNHPGFGVLH*PSVPCLNNPYNSKS*PLFNLFVT 84
YFS S GI+L S L+ LP+ + H P L + K+ PL +F+T
Sbjct: 2932 YFSW--STGITLVAAPQSLILQDLPTAISALKITHVDLTPSLASILTPKTAPLLRVFIT 2988
>SPAC3A12.09c |||urease accessory protein UreD |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 11 TQIFQMKISLHWTACSIRQLTILE 82
T QMK + WTAC IR +TI++
Sbjct: 234 TDSSQMK-KIIWTACEIRSVTIIK 256
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 313 SFEVYLTSQDHIFSTKQYISP*PLHW 236
SF L S ST YIS PLHW
Sbjct: 370 SFSARLQSLQDTESTNLYISNLPLHW 395
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 214 WKNLKDMPSEEAKEKYIALLKKYDPDWSGTPQKTNIDTKETWVAVSSMRYSPEPDLVHNE 393
WK+ D S+E +++ L K+ D P+ ++ K+T ++ Y D NE
Sbjct: 369 WKDYLDNNSKEILDQFGFLQKRPSHDTPLCPEDIKLNQKQT-LSFYESNYGLVDDFFGNE 427
Query: 394 LSLLD 408
L L+
Sbjct: 428 LDGLN 432
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 143 PCLNNPYNSKS*PLFNLFVTFLRWSAALLN 54
P NP + K LFN +F RW LN
Sbjct: 2024 PVEENPLSKKGLSLFNDLFSFPRWKDCQLN 2053
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 557 EDVLLMQSMNVVKQLCIMQFR 619
E VLL+ + KQLCI++F+
Sbjct: 657 ELVLLLPPREIAKQLCILEFQ 677
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 7.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 394 LSLLDAARED--CGERVKELLIKKP------ELKYEKDEDGLTALHWAADRNAINALSAA 549
L L ++ ED C +++ L+ P ELKY D +GL L+ + NA+ +A
Sbjct: 74 LQALSSSAEDVACVKQITHALLAAPFMPESKELKYAMDHNGLNPLYISFGTNALFERNAR 133
Query: 550 LS 555
S
Sbjct: 134 YS 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.131 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,847,413
Number of Sequences: 5004
Number of extensions: 61717
Number of successful extensions: 184
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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