Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30727
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.3  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 475 EKDEDGLTALHWAADR 522
           E+ EDG   LH+ +DR
Sbjct: 124 ERPEDGALILHYYSDR 139


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 475 EKDEDGLTALHWAADR 522
           E+ EDG   LH+ +DR
Sbjct: 124 ERPEDGALILHYYSDR 139


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 295 SGTPQKTNIDTKETWVAVSSMRYSPEPDLVH 387
           SG    T ++        +S  YS  PDL+H
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 295 SGTPQKTNIDTKETWVAVSSMRYSPEPDLVH 387
           SG    T ++        +S  YS  PDL+H
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 295 SGTPQKTNIDTKETWVAVSSMRYSPEPDLVH 387
           SG    T ++        +S  YS  PDL+H
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 34   QSPLDSLFNKAADHLRKVTNKLNNGQLLELYGLFKQ 141
            QSP      +    L KV    N+GQL+ +  L  Q
Sbjct: 1100 QSPHQQQQQQQQKILAKVLTSSNSGQLISVENLLAQ 1135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,896
Number of Sequences: 438
Number of extensions: 3886
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)