Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30726
         (745 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.   175   1e-43

>BC035836-1|AAH35836.1|  439|Homo sapiens LOC374569 protein protein.
          Length = 439

 Score =  175 bits (426), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%)
 Frame = +3

Query: 33  KRVLVLYTGGTFGMLKNEKGVLVPQKDIESVIRRLPQLHDDAYWKNNLAGTDKKDYLALP 212
           +R+L +YTGGT GM ++E GVLVP   + +++R LP  HD+ + +   A    +D L LP
Sbjct: 9   RRLLAVYTGGTIGM-RSELGVLVPGTGLAAILRTLPMFHDEEHAR---ARGLSEDTLVLP 64

Query: 213 DGKDTDDKILYHIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 392
                + +ILY + E   L DSSD TI +W+ +A+ IKR Y  Y GFVV+HGTDT A+  
Sbjct: 65  PAS-RNQRILYTVLECQPLFDSSDMTIAEWVCLAQTIKRHYEQYHGFVVIHGTDTMAFAA 123

Query: 393 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 572
           S+LSFMLE + KTV+LTGAQVPI    SDG  NLL A+L+A    IPEV +FF  +LFRG
Sbjct: 124 SMLSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRG 183

Query: 573 TRVKKYRTRVF 605
            R  K   R F
Sbjct: 184 NRATKVDARRF 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,272,104
Number of Sequences: 237096
Number of extensions: 2663094
Number of successful extensions: 5710
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5702
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)