Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30726
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical p... 181 4e-46
Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical p... 181 4e-46
Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical pr... 181 4e-46
AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical ... 30 1.5
U39994-2|AAB37017.1| 378|Caenorhabditis elegans Hypothetical pr... 30 2.0
U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein. 30 2.0
AL032653-2|CAC70145.1| 264|Caenorhabditis elegans Hypothetical ... 30 2.0
AL032653-1|CAA21714.1| 712|Caenorhabditis elegans Hypothetical ... 30 2.0
Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 29 3.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 3.5
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 3.5
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 29 3.5
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 3.5
AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical
protein C27A7.5e protein.
Length = 684
Score = 181 bits (441), Expect = 4e-46
Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRRLPQLHDDAYWKNNLAGTDKKDYLALP 212
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 92 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 149
Query: 213 DGKDTDDKILYHIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 392
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 150 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 209
Query: 393 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 572
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 210 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 269
Query: 573 TRVKK 587
R K
Sbjct: 270 NRTVK 274
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 554 SKTL*GN*SKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 667
+K + GN + K+ N+ + AFD+PN PL + ++V+
Sbjct: 264 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 301
>Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical
protein C27A7.5d protein.
Length = 647
Score = 181 bits (441), Expect = 4e-46
Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRRLPQLHDDAYWKNNLAGTDKKDYLALP 212
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 55 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 112
Query: 213 DGKDTDDKILYHIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 392
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 113 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 172
Query: 393 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 572
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 173 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 232
Query: 573 TRVKK 587
R K
Sbjct: 233 NRTVK 237
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 554 SKTL*GN*SKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 667
+K + GN + K+ N+ + AFD+PN PL + ++V+
Sbjct: 227 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 264
>Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical
protein C27A7.5c protein.
Length = 715
Score = 181 bits (441), Expect = 4e-46
Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRRLPQLHDDAYWKNNLAGTDKKDYLALP 212
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 123 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 180
Query: 213 DGKDTDDKILYHIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 392
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 181 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 240
Query: 393 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 572
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 241 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 300
Query: 573 TRVKK 587
R K
Sbjct: 301 NRTVK 305
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 554 SKTL*GN*SKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 667
+K + GN + K+ N+ + AFD+PN PL + ++V+
Sbjct: 295 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 332
>Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.5a protein.
Length = 713
Score = 181 bits (441), Expect = 4e-46
Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRRLPQLHDDAYWKNNLAGTDKKDYLALP 212
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 121 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 178
Query: 213 DGKDTDDKILYHIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 392
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 179 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 238
Query: 393 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 572
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 239 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 298
Query: 573 TRVKK 587
R K
Sbjct: 299 NRTVK 303
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 554 SKTL*GN*SKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 667
+K + GN + K+ N+ + AFD+PN PL + ++V+
Sbjct: 293 NKLMRGNRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 330
>AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical
protein C50H11.13 protein.
Length = 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 412 WKPSERLLYSLVLRFQYFNLEAMVTTICYALC 507
W S RLL+ V+ L ++ T CY LC
Sbjct: 26 WTNSSRLLFYSVISISLLTLPILLLTFCYILC 57
>U39994-2|AAB37017.1| 378|Caenorhabditis elegans Hypothetical
protein C48C5.1 protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 644 LPTTEESSGCRMRKYACSILF-YSSSPKEFCSKEHCY 537
L TTE+ C + C I++ +S S KE C EHC+
Sbjct: 6 LNTTEDQCDCLA--FNCPIVYSHSESEKEACYMEHCF 40
>U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 641 PTTEESSGCRMRKYACSILFYSSSPKEFCSKEHCYFWY 528
P+++ ++ R + Y +L + F KEH YFW+
Sbjct: 202 PSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWF 239
>AL032653-2|CAC70145.1| 264|Caenorhabditis elegans Hypothetical
protein Y54E5B.1b protein.
Length = 264
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 641 PTTEESSGCRMRKYACSILFYSSSPKEFCSKEHCYFWY 528
P+++ ++ R + Y +L + F KEH YFW+
Sbjct: 201 PSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWF 238
>AL032653-1|CAA21714.1| 712|Caenorhabditis elegans Hypothetical
protein Y54E5B.1a protein.
Length = 712
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 641 PTTEESSGCRMRKYACSILFYSSSPKEFCSKEHCYFWY 528
P+++ ++ R + Y +L + F KEH YFW+
Sbjct: 201 PSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWF 238
>Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical
protein F14F8.9 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 431 SLSDGFQHERQDRTTVRSCVGAVQNHESIVVMVKSL-NISRHFYPIVYREIRRIFEFIVF 255
+L R+ +++C + H+ +V ++ N SRH P++Y ++ I+ +
Sbjct: 111 TLGGALDFVREIEKALKNCKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEIYSDRIS 170
Query: 254 VNM 246
V++
Sbjct: 171 VDV 173
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 684 CINIFGSTSKVVFASNNGGKFGVS 613
C+ I GS ++V++A GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 684 CINIFGSTSKVVFASNNGGKFGVS 613
C+ I GS ++V++A GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 684 CINIFGSTSKVVFASNNGGKFGVS 613
C+ I GS ++V++A GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 684 CINIFGSTSKVVFASNNGGKFGVS 613
C+ I GS ++V++A GG FG+S
Sbjct: 79 CVVIVGSAAEVIWAEVYGGSFGIS 102
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 684 CINIFGSTSKVVFASNNGGKFGVS 613
C+ I GS ++V++A GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615
>AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical
protein W07E6.3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Frame = +3
Query: 219 KDTDDKILYHIYEYDE------LKDSSDFTIDDWIKMARDIKR 329
KD +++ L H YE+DE +K S ++IDD I + D K+
Sbjct: 30 KDAENENLLHAYEHDEQSSKYFIKPDSRYSIDDDISVKIDGKQ 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,985,804
Number of Sequences: 27780
Number of extensions: 432643
Number of successful extensions: 1222
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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