Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30720
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   4.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.1  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 626 VCATYYSKSMVF*FI*YRSNISSVLAPLQ*Y 534
           V  T   K  ++ F  + SNI+SVL  LQ Y
Sbjct: 241 VSGTQKKKRKIYLFSGHESNIASVLHALQLY 271


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 626 VCATYYSKSMVF*FI*YRSNISSVLAPLQ*Y 534
           V  T   K  ++ F  + SNI+SVL  LQ Y
Sbjct: 256 VSGTQKKKRKIYLFSGHESNIASVLHALQLY 286


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 354 YVSIISSF*ELLTIVSRYRKILRVCFKIHL 443
           Y  ++S++ +L+  V     +LRVC K+ L
Sbjct: 33  YDDLLSNYNKLVRPVVNTSDVLRVCIKLKL 62


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 354 YVSIISSF*ELLTIVSRYRKILRVCFKIHL 443
           Y  ++S++ +L+  V     +LRVC K+ L
Sbjct: 33  YDDLLSNYNKLVRPVVNTSDVLRVCIKLKL 62


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 620 HIHYIVQYLTPIF 658
           HIHY   ++TP+F
Sbjct: 5   HIHYQHYHITPVF 17


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -3

Query: 481 SPPYSTVLLNTILK*ILKQTLNIFRYLDTIVNSS*KLE 368
           SP +++  L  +   I++ +LN+  YLD ++  +  +E
Sbjct: 136 SPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIE 173


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 661 FKNRRQILYYIVYVLRTTVKVW 596
           F +R   +YY  +  RT+  +W
Sbjct: 467 FADRGMKVYYYFFTQRTSTNLW 488


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,200
Number of Sequences: 438
Number of extensions: 3665
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)