Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30719
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.73 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.2  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   6.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.0  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 148 ILLNCCFCKKKQGN*KLKYVAILTNQ 71
           IL N CFC + +    LK + I+T+Q
Sbjct: 480 ILQNACFCARNELMMILKEIKIITDQ 505


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 706 NSISNT---NEQLMIYSFHTSTEITRV*YYNIIN 614
           NS+SN    N     Y+ + +T   ++ YYNIIN
Sbjct: 86  NSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 75  IKTFISKIELTCK 37
           +KTF  KI LTC+
Sbjct: 106 LKTFFHKIALTCE 118


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = -2

Query: 333 NYEKNQQFSVKQYCKVAHNCKNYILRPPNRKCIIYRKRNPDI*NILGL 190
           N+     FS +    +      Y LRPP      YR+   D    LGL
Sbjct: 101 NFPMISVFSRQDIETIIRRNSRYPLRPPQEVISHYRRTRRDRYTNLGL 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,421
Number of Sequences: 438
Number of extensions: 3990
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)