Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30718
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A4M6T7 Cluster: Putative uncharacterized protein precur...    35   1.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2

Query: 101 FLFLRWVDELTAXXVLSGYWSP 36
           FL LRWVDELTA  VLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A4M6T7 Cluster: Putative uncharacterized protein
           precursor; n=1; Petrotoga mobilis SJ95|Rep: Putative
           uncharacterized protein precursor - Petrotoga mobilis
           SJ95
          Length = 123

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 20/74 (27%), Positives = 38/74 (51%)
 Frame = +2

Query: 251 KNYTXAHRSITFTIALXXNINE*FFFLHKYXFVXILXLFEF*DLNXYMYWNILVIRVLFM 430
           KN+T +  +I   I +  NI + FF++  +  + ++ ++ F + N   Y     I V   
Sbjct: 4   KNFTLSLIAILSIIFMLLNIQKSFFYVFSFFVIFLVSIYGFFNDNRIWYHKSAHIIVSSF 63

Query: 431 IXFFLLANDIINYI 472
           I  FLLA +I++ +
Sbjct: 64  IGLFLLAYEILDIL 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,312,757
Number of Sequences: 1657284
Number of extensions: 6505425
Number of successful extensions: 9548
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9547
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)