Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30713
(517 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08) 33 0.11
SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6) 32 0.32
SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27) 31 0.43
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 30 1.3
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_26370| Best HMM Match : Drf_FH1 (HMM E-Value=5.2) 29 2.3
SB_34695| Best HMM Match : CXC (HMM E-Value=4.7) 29 2.3
SB_58586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 29 3.0
SB_6516| Best HMM Match : DUF708 (HMM E-Value=8.5) 29 3.0
SB_58063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_42166| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 4.0
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 28 4.0
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 28 4.0
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 28 4.0
SB_32181| Best HMM Match : CUB (HMM E-Value=0) 28 4.0
SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69) 28 5.3
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 28 5.3
SB_43407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 27 6.9
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 27 6.9
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20893| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-23) 27 6.9
SB_58392| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.2e-24) 27 6.9
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 27 6.9
SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09) 27 9.2
SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 27 9.2
SB_26920| Best HMM Match : Rap_GAP (HMM E-Value=6.9e-29) 27 9.2
SB_43036| Best HMM Match : Chorion_3 (HMM E-Value=1.6) 27 9.2
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_9876| Best HMM Match : TSNR_N (HMM E-Value=7.6) 27 9.2
>SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 34.7 bits (76), Expect = 0.046
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = +3
Query: 132 PAPYLGPGRSPVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGA 311
P P LGPG P G++ A H++ PT+PR P + A RP +P G F G
Sbjct: 234 PHP-LGPGDRPYGSVPMAAASMDARHFV-PTMPREP-FFMEAQRPQLPPVGG----FPGQ 286
Query: 312 ALHLSPERSGERGLPSP 362
A + G P P
Sbjct: 287 APPHMSTHVPQAGFPHP 303
>SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08)
Length = 1158
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 216 HPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSPGFLLRVSVQST 395
H P T AT P +P+ P ALH+SPE G++G +P + +
Sbjct: 704 HTFYPYTNKTATTATTPDLPT---PYLATAAPALHVSPEEPGKQGPSTP----EAMILQS 756
Query: 396 PPHVWVSPRTKR 431
PP+ PRT R
Sbjct: 757 PPNAVERPRTIR 768
>SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 228 PRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERG 350
P+T RW P PP P FS P R G S E + G
Sbjct: 120 PQTTGRWGPTPPPPNPKFSIPFIRGGGGGYRYSLELHNDNG 160
>SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6)
Length = 377
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +3
Query: 162 PVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSG 341
PVGA AG R H P + R P RW P + A H + SG
Sbjct: 293 PVGAHNMAGGHPRVQHVTDPGIDRVPSRWQSKDSAPAKVHAEGAAPTPSPRTHAAHSISG 352
Query: 342 ER 347
E+
Sbjct: 353 EK 354
>SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27)
Length = 562
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -1
Query: 373 NRKPGDGRPRSPDRSGERCNAAPSKRALGPLNEGTGGRVAGGHRSGVRGTV 221
NR R+ +R+ R N + RA N +GGRVA G R G V
Sbjct: 191 NRANNRANNRANNRANNRANNRANNRANNRANNPSGGRVASGWRVASGGRV 241
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 128 TTGALPRTGPEPSRGY*NGGTGLTQSTLHPSHRPTDAGPVAASDTTTGSL 277
TTG L TG + G N G+G T S ++ T G S TTTG +
Sbjct: 580 TTGGL-NTGSGTTTGGVNSGSGTTTSGVNTGSGTTTGGVNTGSGTTTGEV 628
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 128 TTGALPRTGPEPSRGY*NGGTGLTQSTLHPSHRPTDAGPVAASDTTTGSL 277
TTG + TG + G N G+G T ++ T +G S TTTG +
Sbjct: 569 TTGGV-NTGSGTTTGGLNTGSGTTTGGVNSGSGTTTSGVNTGSGTTTGGV 617
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.7 bits (66), Expect = 0.74
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Frame = +3
Query: 48 RRKSPDPHPRGRWGMWELNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*RRAHYIHPTV 227
RR+S D PR R + + RS+ +P RSP RR + +
Sbjct: 825 RRRSRDASPRRRRRSASGSDSSPHRRSE-SPRDRRRRSPEHRRRREASPPRRDRKRYDSP 883
Query: 228 PRTPDRWP--PATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSPGFLLRVSVQSTPP 401
PR R P P R S+S R R D P R + PSP R S ++PP
Sbjct: 884 PRRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPP 943
Query: 402 HVWVSP 419
+ SP
Sbjct: 944 PMRSSP 949
>SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 138 PY-LGPGRSPVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVP 275
PY +G G+ + TA R HY P V TP W P++ P P
Sbjct: 841 PYGIGLGQPMTAPLTTADMNRRYPHY-QPQVFTTPPMWAPSSLNPTP 886
>SB_12656| Best HMM Match : CS (HMM E-Value=0.0018)
Length = 277
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = +3
Query: 204 AHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSPGFLLRVS 383
+ YIHP P P P + PP P R+ + + R+ RG+P P + V
Sbjct: 192 SRYIHPPFPLHPSPLPATSIPPSRYIHPPPFRY----IQVDEPRTLSRGIPLPDTVATVV 247
Query: 384 VQSTPPHVW 410
W
Sbjct: 248 NMGREKFTW 256
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 251 ASDTTTGSLVQRAESPL*WRRVTPFPRAVRGTRSTITRLP 370
A+DT T ++V+ +S P PR++RG + + + P
Sbjct: 1013 AADTLTAAIVESEDSGFSESEAVPRPRSIRGKKPALEKTP 1052
>SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 204 AHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSPGFLLRVS 383
A H VP+ PP RP + + + +ALH+SPE G++G +P
Sbjct: 611 ADLTHNAVPQRARATPPPPRPYLATAA--------SALHVSPEEPGKQGPSTP----EAM 658
Query: 384 VQSTPPHVWVSPR 422
+ +PP+ PR
Sbjct: 659 ILPSPPNAVERPR 671
>SB_26370| Best HMM Match : Drf_FH1 (HMM E-Value=5.2)
Length = 190
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPA-TRPPVPSF 281
Y+HP VP TP P PPVP+F
Sbjct: 77 YLHPIVPSTPSTCIPLYPVPPVPAF 101
>SB_34695| Best HMM Match : CXC (HMM E-Value=4.7)
Length = 186
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 162 PVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSG 341
PVGA AG R H P R P R P + A H + SG
Sbjct: 87 PVGAHNMAGGHPRVQHVTDPGFDRVPSRRQSKDSAPAKVHAEGEAPAPSPRTHAAHSMSG 146
Query: 342 ERGLPSP 362
E+G +P
Sbjct: 147 EKGDHTP 153
>SB_58586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 254 WRPPVRRPWDGGMDVMCSASTLSRRFNSP 168
WR PVR+ WDG + V S + R P
Sbjct: 118 WRKPVRQLWDGVLRVFSSTTQQKRPQEGP 146
>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 654
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 385 TLTRNRKPGDGRPRSPDRSGERCNAAPSKRALGPLNE 275
TL +R P G P++ + C AAP+ + PLNE
Sbjct: 129 TLDCDRLPKKGDPQAKSDPTKLCMAAPNIKQTAPLNE 165
>SB_6516| Best HMM Match : DUF708 (HMM E-Value=8.5)
Length = 159
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 254 WRPPVRRPWDGGMDVMCSASTLSRRFNSP 168
WR PVR+ WDG + V S + R P
Sbjct: 118 WRKPVRQLWDGVLRVFSSTTQQKRPQEGP 146
>SB_58063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +3
Query: 162 PVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSG 341
PVGA AG R H P R P R P + A H + SG
Sbjct: 87 PVGAHNMAGGHPRVQHVTDPGFDRVPSRRQSKDSAPAKVHAEGEAPAPSPRTHAAHSMSG 146
Query: 342 ERG 350
E+G
Sbjct: 147 EKG 149
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = +3
Query: 45 HRRKSPDPHPRGRWGMWELNLTKNSCRSQPAPYL--GPGRSPVGAIETAGQG*RRAHYIH 218
HRR DP R E ++ ++ R P + G GR + G+ R Y
Sbjct: 638 HRRPYDDPEGLERESRGERDVRRDDPREDRRPGMSEGRGRDRPERPDRTGERGREPRYST 697
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSPGF 368
P P R P+ PP P + P G + S R +R P GF
Sbjct: 698 PQGPDYHRR--PSPSPPGPPRNAPYGPPRGRSPPPS-HRFDDRRRPDEGF 744
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRAR-FDGAALHLSPERSGERGLPSPGFLLRVSVQST 395
PT PP + PP S SGP G P G R +P PG +
Sbjct: 233 PTSDPNMGHHPPISGPPTTSMSGPPIPVHHGMPPQYGP---GRRDMPPPGAPPGMLPPGM 289
Query: 396 PPH 404
PPH
Sbjct: 290 PPH 292
>SB_42166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 213 IHPTVPRTPDRWPPATRPPVPSF-SGPRARFDGAALHLSPERSGERGLPSPGFLLRVSVQ 389
+ PT D WPP T PP S+ + AR D + L +GE P G L V
Sbjct: 33 VKPTTKPVTD-WPPYTHPPFASWRNSEEARTDRPSQQLR-SLNGEWDAPCSGALSAAGVV 90
Query: 390 ST 395
T
Sbjct: 91 VT 92
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 225 VPRTPDRWPPATRPPVPSFSGPRARFDGAA 314
VPR D RPP P F G R R D A
Sbjct: 1169 VPRESDFLSVLNRPPTPRFLGHRKRTDSLA 1198
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSGERGLPSP 362
P + P R P P P SGP + +P R GE G+P P
Sbjct: 656 PGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIPGP 703
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -3
Query: 275 GNRWSCRWRPPVRRPWDG--GMDVMCSASTLSRRFNSPDWAPAR 150
G R +C WR +R WDG GM + C R N W R
Sbjct: 229 GMRINCNWRKGMRINWDGWEGMRINCD-EWEGMRINWDGWEGMR 271
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -1
Query: 400 GGVLCTLTRNRKPGDGRPRSPDRSGERCNAAPSKRALGPLNEGTG-GRVAGGHRSGVRGT 224
G L L RN D S D +G A GP N+G G G GG G GT
Sbjct: 1645 GSDLRILARNISINDAGSLSLDGAGYSTAHASKSGVNGPANKGIGKGTEPGGSGGGHGGT 1704
Query: 223 VG 218
G
Sbjct: 1705 GG 1706
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 157 GAQSGLLKRRDRVDAEHITSIPPSHGRRTGGRQRHDHRFPRSAGREPA 300
G S + + D H S PS RR+ R R R P+S R P+
Sbjct: 444 GETSYIRVKSDLQSRSHSRSRSPSPRRRSRSRSRSPRRRPKSYSRSPS 491
>SB_32181| Best HMM Match : CUB (HMM E-Value=0)
Length = 588
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 415 LPAQNGWDP*LLGGQVTDTTPVPTPW 492
+ A GWD + DT+P PTPW
Sbjct: 528 ISAAFGWDIISIEPYTLDTSPTPTPW 553
>SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69)
Length = 472
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPA-TRPPVPSF 281
Y+H VP TP+ + P PPVP+F
Sbjct: 55 YLHSIVPSTPNTYIPLYPVPPVPTF 79
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPA-TRPPVPSF 281
Y+H VP TP + P PPVP+F
Sbjct: 151 YLHSIVPSTPSTYIPLYPVPPVPAF 175
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPA-TRPPVPSF 281
Y+H VP TP + P PP+P+F
Sbjct: 119 YLHSIVPSTPSTYIPLYPVPPIPTF 143
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPA-TRPPVPSF 281
Y+H VP TP + P PP+P+F
Sbjct: 279 YLHSIVPSTPSTYIPLYPVPPIPTF 303
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = +3
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRARFDGAA---LHLSPERSGERGLPSPGFLLRVSV- 386
P T R + R PVP+++ PR + SP P P + R ++
Sbjct: 583 PVPAYTTPRVLHSPRTPVPAYTSPRVHHSPRTPLPAYTSPRVHHSPRTPLPAYSPRTTLP 642
Query: 387 QSTPPHVWVSPRT 425
+T P V SPRT
Sbjct: 643 ANTTPRVHHSPRT 655
>SB_43407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRARFDG-AALHLSPERSGERGLPSPGFLLRVSVQST 395
P P P+ P PP+ S S R G A H + + + G P P +
Sbjct: 192 PGAPEPPEPDNPPASPPMASLSQDRHSASGNAVTHPTSQENSYTGPPPPPYTSLPPDDPP 251
Query: 396 PPH 404
PP+
Sbjct: 252 PPY 254
>SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 93 WELNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*---RRAHYIHPTVPRTPDR--WPPA 257
WEL ++ + P P+L G P + QG +R+ +H P PD+ PP
Sbjct: 167 WELPRVPSANATLP-PHLQYGPPPPTSPGLCNQGYNLHQRSQPVHSMEP-FPDQPPGPPP 224
Query: 258 TRPPVPSFSGPRARFDG 308
PP+P F + +F G
Sbjct: 225 GPPPLPDFRTLQGKFPG 241
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 219 PTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSP 329
P +P P PP PP P+ + P A L L+P
Sbjct: 35 PPIPHGPRPLPPLREPPTPAPTPPPALPSTPTLPLAP 71
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 364 PGDGRPRSPDRSGERCNAAPSKRALGPLNEGTGGRVAGGHRS 239
P GRP SP G + P K + + GG AGG +S
Sbjct: 243 PRPGRPPSPSTRGMKPLPPPKKPDVVAEKDQKGGNEAGGTKS 284
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 252 PATRPPVPSFSGPRARFDGAALHLSPERS---GERGLPSP 362
P RPP PS+S R + + PERS GERG P
Sbjct: 161 PRERPPPPSYSSERVGYGDK--YPPPERSYSGGERGYGPP 198
>SB_20893| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-23)
Length = 435
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 394 VLCTLTRNRKPGDGRPRSPDRSGERCNAAPSKR 296
++C LTR+R PG+ + + +S R AA S+R
Sbjct: 165 IICRLTRHRMPGEEQV-AGQQSHSRAQAAKSRR 196
>SB_58392| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.2e-24)
Length = 1064
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 397 GVLCTLTRNRKPGDGRPR 344
G C L RNRKP +GR R
Sbjct: 875 GPCCELNRNRKPEEGRSR 892
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 219 DGCNVLCVNPVPPFQ*PRLGSGP 151
DGC+ CV P+PP P GP
Sbjct: 81 DGCDFRCVPPIPPPTPPPQRRGP 103
>SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 210 YIHPTVPRTPDRWPPATRPPVPS 278
Y H T PR +PP PPVP+
Sbjct: 256 YGHSTYPRYGGGYPPNLHPPVPA 278
>SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09)
Length = 197
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 222 TVPRTPDRWPPATRPPVPSFSGPRARFDG 308
T+P TP PP T PP P+ + DG
Sbjct: 125 TLPPTPATLPPTTVPPAPAPVPDKGFVDG 153
>SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +1
Query: 175 LKRRDRVDAEHITSIPPSHGR---RTGGRQRHDHRFPRSAGREPALMAPRYT--FPQSGQ 339
L+R + DAEH T+ P +H + + G++ D + ++A T P S
Sbjct: 110 LRRHQKSDAEHFTNFPYNHVQFYYNSSGQRGQDGGSSKGPMSPNDVLAAVKTPVSPVSSN 169
Query: 340 GNAVYHHPASYC 375
G A H S C
Sbjct: 170 GTAFSEHGGSPC 181
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/81 (30%), Positives = 32/81 (39%)
Frame = +1
Query: 55 NRRIPTRAAGGVCGS*TSLKTPAAHNRRPTSDRAGAQSGLLKRRDRVDAEHITSIPPSHG 234
+R P R G +S + P+A R +SD + + RRD H S S
Sbjct: 42 SRESPERKRPSSLGRDSSERRPSA---RVSSDNSRSPP---HRRDSSRRSHSPSRRSSDD 95
Query: 235 RRTGGRQRHDHRFPRSAGREP 297
R T R R D R S R P
Sbjct: 96 RSTDARDRRDRRRSSSRERRP 116
>SB_26920| Best HMM Match : Rap_GAP (HMM E-Value=6.9e-29)
Length = 1890
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 412 TQTWGGVLCTLTRNRKPGDGRPRSPDRSGERCNAAPS 302
T GG T N K G RP++P+ G + PS
Sbjct: 641 TDGTGGTKAERTLNEKAGKERPKTPEPQGTGESTTPS 677
>SB_43036| Best HMM Match : Chorion_3 (HMM E-Value=1.6)
Length = 621
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +3
Query: 162 PVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGAALHLSPERSG 341
PVGA AG R H P + R P R P + A H + SG
Sbjct: 537 PVGAQNMAGGHPRVQHVTDPGIDRVPSRRQSMDSAPAKVHAEGAAPAPSPRTHAAHSMSG 596
Query: 342 ER 347
E+
Sbjct: 597 EK 598
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Frame = +3
Query: 132 PAPYLGPGRSPVGAIETAGQG*RRAHYIHPTVPRTPDRWPPATRPPVPSFSGPRARFDGA 311
P P + P +P + G +R Y PR P PP R P P R
Sbjct: 587 PHPRVPPPGAPHPKVPPPGAPYQRLPYSGAYHPRLPPPGPPYQRVPPPGAPIQRVPLPET 646
Query: 312 ALHLSP-ERSGERGLPSPGFLLRVSVQSTPPHVWVSP 419
P R+ G PSP + + P V +SP
Sbjct: 647 HHQRVPYSRATHHGEPSP------RIPTVTPRVPISP 677
>SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 272 SLVQRAESPL*WRRVTPFPRAVRGTRSTITRL 367
S+ RAESP+ W +TP A+R S R+
Sbjct: 816 SMTDRAESPIFWPGITPAITALRERCSHCNRM 847
>SB_9876| Best HMM Match : TSNR_N (HMM E-Value=7.6)
Length = 197
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 111 KNSCRSQPAPYLGPGRSPVGAIETAGQG*RRAHYIHPTVPR 233
K+ P P L R+ V +IE+ G+G R+ P V R
Sbjct: 94 KSKLPEPPPPSLKVRRATVASIESLGEGHRKGSLFMPPVQR 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,651,318
Number of Sequences: 59808
Number of extensions: 489301
Number of successful extensions: 1802
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -