Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30713
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    28   0.066
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   1.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   1.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   10.0 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   10.0 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   10.0 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   10.0 

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 27.9 bits (59), Expect = 0.066
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -1

Query: 334 RSGERCNAAPSKRALGPLNEGTGGRVAGGHRSGVRGTVGWM*CALRQPCPAVSI 173
           R+G  C++  S  + G  +EG  G   G  R  ++  + +  C   Q C  + I
Sbjct: 13  RTGTNCSSGSSSDSDGQTDEGFVGDSQGFFRRSIQQKIQYRPCTKNQQCSILRI 66


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 334 RSGERCNAAPSKRALGPLNEGTGGRVAGGHRSGVRGTV 221
           R+ +RCNA  +   +G       G V+ G+ + V GT+
Sbjct: 359 RAVKRCNATGAFSWIGSDGWSARGLVSDGNEAEVEGTL 396


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = +3

Query: 72  PRGRWGMWELNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*RRAHYIHPTVPRTPD 242
           P   + +W      N  R  P  ++G      G    + +  R+A+Y+H   P  PD
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWVGV----FGGSAWSWREERQAYYLHQFAPEQPD 193


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 254  WRPPVRRPWDG 222
            W+PP R  W+G
Sbjct: 997  WKPPPREDWNG 1007


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = +3

Query: 72  PRGRWGMWELNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*RRAHYIHPTVPRTPD 242
           P   + +W      N  R  P  ++G      G    + +  R+A+Y+H   P  PD
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWVGV----FGGSAWSWREERQAYYLHQFAPEQPD 193


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 252 PATRPPVPSFSGP 290
           PA  PP PS SGP
Sbjct: 341 PAPPPPPPSSSGP 353


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 99  LNLTKNSCRSQPAPYLGP 152
           LNL+K S    P P +GP
Sbjct: 875 LNLSKKSPSPSPRPLVGP 892


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 440 GSHPFCAGRDPDVGWRALHAHPQ 372
           GS    +G+    GW++++A PQ
Sbjct: 920 GSGIVASGQQHAGGWQSIYAQPQ 942



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 311 GAIKAGSRPAERGNRWS 261
           G + AG    ++GN WS
Sbjct: 752 GVVNAGGWLGQQGNSWS 768


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 384 VQSTPPHVWVSPRTKRV 434
           + S  P +W +PRTKR+
Sbjct: 347 MDSGGPVLWQNPRTKRL 363


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 231 VGRWDGCNVLC 199
           V +W GC V+C
Sbjct: 282 VCKWPGCEVIC 292


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 PAPYLGPGRSPVGAIETA 185
           P+P  GPG  P   I+ A
Sbjct: 396 PSPPRGPGGVPTSVIQAA 413


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 457 QVTDTTPVPTPWLGGG 504
           +V   TPV   WL GG
Sbjct: 830 EVHGDTPVTVTWLKGG 845


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 457 QVTDTTPVPTPWLGGG 504
           +V   TPV   WL GG
Sbjct: 826 EVHGDTPVTVTWLKGG 841


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 81  RWGMWELNLTKNSCRSQPAPYLGPGRSP 164
           RW  ++  +    C + PA Y    R P
Sbjct: 394 RWFTYQETVDPAGCNAGPAKYYLKSRDP 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 71  PARQVGYVGVEPH 109
           P R+   VGV+PH
Sbjct: 490 PPREAPLVGVQPH 502



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 225  VPRTPDRWPPATRPPVPSFSG 287
            VP  P+R P     P PS  G
Sbjct: 1365 VPERPERVPTVDLSPSPSDRG 1385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,229
Number of Sequences: 438
Number of extensions: 4575
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)