Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30710
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   1.3  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   4.1  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   4.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.1  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 7   MSASNGKRIFQIGPVVSEPIRNKQTN 84
           ++ S G+R   +GP  SE +R++  N
Sbjct: 510 IAGSTGERFQDLGPAASESVRSQSNN 535


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 648 KKNRHMFFLFSLRCSLIG 701
           +K RHMF   + +CSL G
Sbjct: 117 RKTRHMFEQMNAQCSLFG 134


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 648 KKNRHMFFLFSLRCSLIG 701
           +K RHMF   + +CSL G
Sbjct: 219 RKTRHMFEQMNAQCSLFG 236


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 178 KSYNTFLITKLFCILHLNINTSILIL*RGKI 86
           KS     +  LFC + LN+N    ++ +G+I
Sbjct: 120 KSVQNKRVQDLFCSVQLNVNNPNFLIMQGRI 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,203
Number of Sequences: 2352
Number of extensions: 15162
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)