Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30706
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF361354-1|AAL50049.1| 426|Homo sapiens voltage-dependent calci... 31 3.8
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 30 5.1
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 29 8.9
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 29 8.9
BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein. 29 8.9
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 8.9
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 29 8.9
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 8.9
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 8.9
AL109810-2|CAI19160.1| 746|Homo sapiens tripartite motif-contai... 29 8.9
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 8.9
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 29 8.9
AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens ... 29 8.9
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 29 8.9
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 29 8.9
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 29 8.9
AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein. 29 8.9
AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein. 29 8.9
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 29 8.9
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 29 8.9
>AF361354-1|AAL50049.1| 426|Homo sapiens voltage-dependent calcium
channel gamma-8 subunit protein.
Length = 426
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 167 HSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQRHAQPRVSELLRRFEP 343
H+ F + G G+T V R P P R P+ SA A P T + A + L R+ P
Sbjct: 370 HNAFPKEAGGGVTVTVTRPPAPPAPRHPAPSAPA---PGTLAKGAAASNTNTLNRKTTP 425
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.3 bits (65), Expect = 5.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1230 YMSSSASMQP-ITRPPQPSYQTPPSLSNHISRAPSPASFQRSLENRMSPSKSPFLPS 1285
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 1277 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1311
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 1222 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1256
>BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein.
Length = 1721
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 1231 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1265
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1009 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1064
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 758 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 813
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1009 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1064
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1009 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1064
>AL109810-2|CAI19160.1| 746|Homo sapiens tripartite
motif-containing 67 protein.
Length = 746
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 166 PQLVLFEAGRRHDAGCCSRAAVAHSAEAERQCGGA 270
PQ +L G AG + A++ H A A CGGA
Sbjct: 46 PQPLLLSRGSGLQAGAAAAASLEHDAAAGPACGGA 80
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1009 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1064
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 758 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 813
>AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ44831 fis, clone BRACE3047482, moderately
similar to Homo sapiens tripartite motif-containing 9
(TRIM9). ).
Length = 756
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 166 PQLVLFEAGRRHDAGCCSRAAVAHSAEAERQCGGA 270
PQ +L G AG + A++ H A A CGGA
Sbjct: 46 PQPLLLSRGSGLQAGAAAAASLEHDAAAGPACGGA 80
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1438 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1493
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1013 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 1068
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 759 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 814
>AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein.
Length = 1735
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 1244 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1278
>AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein.
Length = 1735
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 1244 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1278
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PASCRRPASNKTSCGLMPFHVTLYGSPPLGGFPGA 105
P+ CR PA GL T GSP LG PGA
Sbjct: 382 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 416
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 179 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 346
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 758 YMSSSASMQP-ITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS 813
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,012,347
Number of Sequences: 237096
Number of extensions: 1517273
Number of successful extensions: 5642
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5634
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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