Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30705
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   5.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.9  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/59 (23%), Positives = 22/59 (37%)
 Frame = -1

Query: 416 VKVWWQKRYNRGKSLPKCIVWFPQKPSALKSRISAQNRNGQVQCQTSTFSPPYPMWGRH 240
           +KVW+Q R  + K     I W P          +A   +         + PP P++  H
Sbjct: 115 IKVWFQNRRMKDKRQRMAIAW-PYAAVYTDPAFAASIFHAAATSLPLHYPPPPPVYTHH 172


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 131 PKKTWMECVNDDMRERERGVSAEMTADRRE 220
           P  TW E     + +RER +S  + +D  E
Sbjct: 550 PTNTWREAEQRILVQRERLISLGINSDALE 579


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 412 KCGGKRDTTEVSLCPS 365
           KCG  R+  EVS C S
Sbjct: 412 KCGSLREIKEVSDCDS 427


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 278 STFSPPYPMWGRHSEFFYSIL 216
           ST   PYP  G  S  FYS L
Sbjct: 16  STDQNPYPSIGVESSAFYSPL 36


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 443 IRCFYVFMVVKVWWQKRYNRGKSLPKCIVWFPQ 345
           +R F  +   K  WQ       SL KC V  P+
Sbjct: 114 MRNFPYYRENKQGWQNSIRHNLSLNKCFVKVPR 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,236
Number of Sequences: 336
Number of extensions: 3298
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)