Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30705
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.4  
AF457550-1|AAL68780.1|   92|Anopheles gambiae antigen 5-related ...    23   9.8  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 225 FNSLLSAVISALTPLSLSLISSFTHSIHVFFGRPLPPLPCTTISIHL 85
           F S  S   S     ++  +   T ++ VFF +P P    +T+  HL
Sbjct: 189 FRSGFSTGFSKALDATILALPGSTSNVSVFFLKPSPDTDVSTLETHL 235


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -3

Query: 297 TGSMSDFYFFSTLSYVGSAQRIFLFNSLLSAVISALTPLSLSLISS 160
           T S     +   LS  GSA+R    NS L ++++A+T   LS ISS
Sbjct: 160 TSSTVSLTYEDELSPGGSARRKTKPNSPLGSLLAAVTSPVLSRISS 205


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 225 FNSLLSAVISALTPLSLSLISSFTHSIHVFFGRPLPPLPCTTISIHLLVTYI 70
           F ++L+  + + +   ++L  S   S+HVFF   +  +P T++ + LL  Y+
Sbjct: 259 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 310


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 225 FNSLLSAVISALTPLSLSLISSFTHSIHVFFGRPLPPLPCTTISIHLLVTYI 70
           F ++L+  + + +   ++L  S   S+HVFF   +  +P T++ + LL  Y+
Sbjct: 259 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 310


>AF457550-1|AAL68780.1|   92|Anopheles gambiae antigen 5-related 3
           protein protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 382 PLLYLFCHHTFTTI 423
           P LYL C+++FT I
Sbjct: 42  PYLYLVCNYSFTDI 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,214
Number of Sequences: 2352
Number of extensions: 12945
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)