Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30702
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.93 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   6.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 139 IYCVFIW--ASRFHTPRACVGGGGPHRHVDCSEVEACCTL 26
           + C+  W  A+ F +P   +   GP  +VD S V  C +L
Sbjct: 189 LICLLAWFIAALFTSPILAITQYGPEEYVDGSIVFVCFSL 228


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 214 DSFTEHLCLMTNSNNILKYV*LC 146
           D F   LC++TN+  IL  V +C
Sbjct: 278 DIFLPLLCILTNTLEILITVTVC 300


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 214 DSFTEHLCLMTNSNNILKYV*LC 146
           D F   LC++TN+  IL  V +C
Sbjct: 103 DIFLPLLCILTNTLEILITVTVC 125


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -3

Query: 145 YYIYCVFIWASR 110
           YY+ C++ W  R
Sbjct: 291 YYVMCIWYWLDR 302


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -3

Query: 145 YYIYCVFIWASR 110
           YY+ C++ W  R
Sbjct: 291 YYVMCIWYWLDR 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,886
Number of Sequences: 336
Number of extensions: 4765
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)