Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30700
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.4  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   8.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.4  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 169 LTYHYRYSRNV*CLT*GKILRADNRISDVHILV 71
           L YH R SR+   ++ G + R  NRIS   +L+
Sbjct: 15  LYYHQRCSRDWFRISAGCVSRISNRISRNRVLL 47


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 58  FEQYLRVYGRHLFDYLPSEFYLMSNIRHSY 147
           +++ L V GRH+ D+L     L   ++ SY
Sbjct: 82  YDRVLSVLGRHVRDFLNGLDNLHEYLKFSY 111


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 323 WLVNLRNDISTNWV 364
           W+ N+ N   TNWV
Sbjct: 336 WVANVPNGSVTNWV 349


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 82  HILVGIVRTITRQ 44
           HI++GIV+T+ ++
Sbjct: 144 HIVIGIVKTVAKK 156


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 100 NRISDVHILVGIVRTITRQTLYYFID 23
           N   + +I +  V  I R+TLYYF +
Sbjct: 212 NCCPEPYIDITFVVIIRRRTLYYFFN 237


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/40 (22%), Positives = 23/40 (57%)
 Frame = +2

Query: 479 LKLTLLFIVIIITESNTHININLSMKYMYFLHGY*VSSQS 598
           +++ +     I+ +++ +   N+S KY    +GY ++S+S
Sbjct: 94  VQIAVAVYAFIVVKNDDNFR-NISEKYQEIFNGYFLNSES 132


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 82  HILVGIVRTITRQ 44
           HI++GIV+T+ ++
Sbjct: 144 HIVIGIVKTVAKK 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,195
Number of Sequences: 438
Number of extensions: 3817
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)