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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30694
         (703 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25554| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.097
SB_50161| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)                       30   1.6  
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.6  
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)                29   4.8  
SB_52307| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  

>SB_25554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 36

 Score = 34.3 bits (75), Expect = 0.097
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +2

Query: 515 LDWAAFAVMTLPSLAIPFGLWY 580
           +DW  F++M++P++ IPF +WY
Sbjct: 1   VDWGLFSLMSIPTMLIPFMVWY 22


>SB_50161| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 511

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = -2

Query: 411 ALYVTSAELKLK*PYLLDRTVTTWDTLV*---GAILSISAVSCPPTTVNTSGWKPLSTSF 241
           +LYV    L+ + P + D T ++   +V    G +LSISAV+ P T + +SG + L    
Sbjct: 101 SLYVLQDLLQGEPPIVQDVTFSSEYLVVLLQSGLVLSISAVT-PDTAILSSG-RELVVKH 158

Query: 240 TSTAGALPTLNNVYFTSISIFSTKYL 163
             +A A+PT NN   T  ++ S  ++
Sbjct: 159 QDSAIAMPTGNNTIKTVATVESGGFI 184


>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
          Length = 523

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 382 VEIAVLIGPDSHYMGYISLRCNPIDFRGQLSAYYSKHVRMEAVVHE 245
           VE+ VL G +  Y G +  + +P D   +++ Y   HV  EA+V E
Sbjct: 54  VELPVLCGGEKVYTGNVKYQVSPFDHSNKIAKY---HVADEALVKE 96


>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1017

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = -1

Query: 490 IIFEGYDGSLSWSTADRILDVCGVFAGFVCDFRRAEVEIAVLIGPDSHYMGYISLRCNPI 311
           I  +GY G+    +   + ++ G++ G +CD RR   +   + G    ++G  +L C+  
Sbjct: 396 ICLDGYTGADCSLSKALVPELFGIYDGGLCDIRRRPCKKTDIFG--DGFIGSENLTCHST 453

Query: 310 DFR 302
           +F+
Sbjct: 454 EFK 456


>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2388

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1437 RYPYALLTIPLRSTYDTLTLYLRYPYALLTI 1467



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1459 RYPYALLTIPLRSTYDTLTLYLRYPYALLTI 1489



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1481 RYPYALLTIPLRSTYDTLTLYLRYPYALLTI 1511



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1503 RYPYALLTIPLRSTYDTLTLYLRYPYALLTI 1533



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1525 RYPYALLTIPLRSTYDTLTLYLRYPYALLTI 1555



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY LL I
Sbjct: 1591 RYPYALLTVPLRSTYDTLTLYLRYPYPLLTI 1621



 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL I
Sbjct: 1547 RYPYALLTIPLRSTYDTLTLNLRYPYALLTI 1577



 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 257  RCPRVSLQQPVRSQH*TMCILLVYPYSLLNI 165
            R P   L  P+RS + T+ + L YPY+LL +
Sbjct: 1569 RYPYALLTIPLRSTYGTLQLYLRYPYALLTV 1599


>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
          Length = 325

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 387 ARRKSHTKPAKTPQTSNIRSAVLQEREPS*PSKIMIESSPRISSIGRHSQL*PSR 551
           A+ ++ T PA+ P  S+  +  +Q+R P+ P+K    SS     + + +   P++
Sbjct: 106 AQPRNPTSPAEKPHQSSKETQPVQQRNPAGPAKKPSRSSKETQPVQQRNPASPAK 160


>SB_52307| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 535 CECRPIEDMRGELSIIIFEGYDGS---LSWSTADRILDVCGVF 416
           C+ RP+  M    S+++ E Y G+   L+  TAD ++D C  F
Sbjct: 255 CKERPVPSMT---SVLVKESYTGAHQLLTQGTADVVIDTCSDF 294


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,891,905
Number of Sequences: 59808
Number of extensions: 434318
Number of successful extensions: 994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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