Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30690
         (318 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1325 - 26146775-26147247,26147397-26148579                       29   1.0  
04_04_1375 + 33040329-33040854,33041611-33041838,33041984-330420...    26   7.4  

>08_02_1325 - 26146775-26147247,26147397-26148579
          Length = 551

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 1   KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNA 108
           K  KK    K++ K++  DDD   N+   KA ++NA
Sbjct: 44  KHSKKHKREKHKDKRKNKDDDRYTNQTLEKATLRNA 79


>04_04_1375 +
           33040329-33040854,33041611-33041838,33041984-33042081,
           33042406-33042450,33042678-33042846,33042917-33043026,
           33043983-33044051,33044085-33044158,33044738-33044804,
           33044876-33044988,33045148-33045237,33046030-33046144,
           33046230-33046388
          Length = 620

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   KKVKKKDYSKNEVKKQTND 57
           K   KKDYSK+ V  QTN+
Sbjct: 227 KSTDKKDYSKSNVGYQTNN 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,401,589
Number of Sequences: 37544
Number of extensions: 45218
Number of successful extensions: 105
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)