Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30690
(318 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04791-1|AAA52397.1| 1493|Homo sapiens excision repair protein p... 38 0.009
BC127104-1|AAI27105.1| 1493|Homo sapiens excision repair cross-c... 38 0.009
AY204752-1|AAO13487.1| 1493|Homo sapiens excision repair cross-c... 38 0.009
AL138760-2|CAH70291.1| 1493|Homo sapiens excision repair cross-c... 38 0.009
AB209504-1|BAD92741.1| 870|Homo sapiens excision repair cross-c... 38 0.009
BC039300-1|AAH39300.1| 335|Homo sapiens SRGAP3 protein protein. 30 1.7
AF464189-1|AAN57784.1| 1075|Homo sapiens WAVE-associated Rac GTP... 30 1.7
AF427144-1|AAN07095.1| 1099|Homo sapiens MEGAP transcript varian... 30 1.7
AB032982-1|BAA86470.1| 348|Homo sapiens KIAA1156 protein protein. 30 1.7
AB007871-1|BAA24841.2| 1061|Homo sapiens KIAA0411 protein. 30 1.7
U31216-1|AAA87844.1| 906|Homo sapiens metabotropic glutamate re... 28 6.9
U31215-1|AAA87843.1| 1194|Homo sapiens metabotropic glutamate re... 28 6.9
L76631-1|AAB05338.1| 906|Homo sapiens metabotropic glutamate re... 28 6.9
L76627-1|AAB05337.1| 1194|Homo sapiens metabotropic glutamate re... 28 6.9
AL592423-3|CAH71182.1| 1194|Homo sapiens glutamate receptor, met... 28 6.9
AL592423-2|CAH71181.1| 906|Homo sapiens glutamate receptor, met... 28 6.9
AL096867-2|CAI20336.1| 1194|Homo sapiens glutamate receptor, met... 28 6.9
AL096867-1|CAI20335.1| 906|Homo sapiens glutamate receptor, met... 28 6.9
AL035698-3|CAI22469.1| 1194|Homo sapiens glutamate receptor, met... 28 6.9
AL035698-2|CAI22468.1| 906|Homo sapiens glutamate receptor, met... 28 6.9
AB208837-1|BAD92074.1| 901|Homo sapiens glutamate receptor, met... 28 6.9
>L04791-1|AAA52397.1| 1493|Homo sapiens excision repair protein
protein.
Length = 1493
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 KKKDYSKNEVKKQTNDDDYVLNKLFAKA-AVKNALQHDVVV 129
K+ +K+E K+Q+NDD YVL KLF K+ V + ++HD ++
Sbjct: 1233 KQDSENKSEAKEQSNDD-YVLEKLFKKSVGVHSVMKHDAIM 1272
>BC127104-1|AAI27105.1| 1493|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1493
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 KKKDYSKNEVKKQTNDDDYVLNKLFAKA-AVKNALQHDVVV 129
K+ +K+E K+Q+NDD YVL KLF K+ V + ++HD ++
Sbjct: 1233 KQDSENKSEAKEQSNDD-YVLEKLFKKSVGVHSVMKHDAIM 1272
>AY204752-1|AAO13487.1| 1493|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1493
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 KKKDYSKNEVKKQTNDDDYVLNKLFAKA-AVKNALQHDVVV 129
K+ +K+E K+Q+NDD YVL KLF K+ V + ++HD ++
Sbjct: 1233 KQDSENKSEAKEQSNDD-YVLEKLFKKSVGVHSVMKHDAIM 1272
>AL138760-2|CAH70291.1| 1493|Homo sapiens excision repair
cross-complementing rodent repairnt regulator of
chromatin, sub protein.
Length = 1493
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 KKKDYSKNEVKKQTNDDDYVLNKLFAKA-AVKNALQHDVVV 129
K+ +K+E K+Q+NDD YVL KLF K+ V + ++HD ++
Sbjct: 1233 KQDSENKSEAKEQSNDD-YVLEKLFKKSVGVHSVMKHDAIM 1272
>AB209504-1|BAD92741.1| 870|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 870
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 KKKDYSKNEVKKQTNDDDYVLNKLFAKA-AVKNALQHDVVV 129
K+ +K+E K+Q+NDD YVL KLF K+ V + ++HD ++
Sbjct: 610 KQDSENKSEAKEQSNDD-YVLEKLFKKSVGVHSVMKHDAIM 649
>BC039300-1|AAH39300.1| 335|Homo sapiens SRGAP3 protein protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNALQHDV 123
K+ ++ YS+N++K +DY+LN AA+ HDV
Sbjct: 102 KEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDV 142
>AF464189-1|AAN57784.1| 1075|Homo sapiens WAVE-associated Rac GTPase
activating protein protein.
Length = 1075
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNALQHDV 123
K+ ++ YS+N++K +DY+LN AA+ HDV
Sbjct: 222 KEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDV 262
>AF427144-1|AAN07095.1| 1099|Homo sapiens MEGAP transcript variant a
protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNALQHDV 123
K+ ++ YS+N++K +DY+LN AA+ HDV
Sbjct: 222 KEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDV 262
>AB032982-1|BAA86470.1| 348|Homo sapiens KIAA1156 protein protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNALQHDV 123
K+ ++ YS+N++K +DY+LN AA+ HDV
Sbjct: 91 KEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDV 131
>AB007871-1|BAA24841.2| 1061|Homo sapiens KIAA0411 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KKVKKKDYSKNEVKKQTNDDDYVLNKLFAKAAVKNALQHDV 123
K+ ++ YS+N++K +DY+LN AA+ HDV
Sbjct: 208 KEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDV 248
>U31216-1|AAA87844.1| 906|Homo sapiens metabotropic glutamate
receptor 1 beta protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>U31215-1|AAA87843.1| 1194|Homo sapiens metabotropic glutamate
receptor 1 alpha protein.
Length = 1194
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>L76631-1|AAB05338.1| 906|Homo sapiens metabotropic glutamate
receptor protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>L76627-1|AAB05337.1| 1194|Homo sapiens metabotropic glutamate
receptor 1 alpha protein.
Length = 1194
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL592423-3|CAH71182.1| 1194|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 1194
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL592423-2|CAH71181.1| 906|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL096867-2|CAI20336.1| 1194|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 1194
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL096867-1|CAI20335.1| 906|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL035698-3|CAI22469.1| 1194|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 1194
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AL035698-2|CAI22468.1| 906|Homo sapiens glutamate receptor,
metabotropic 1 protein.
Length = 906
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 643 VCPFTLIAKPTTTSC 657
>AB208837-1|BAD92074.1| 901|Homo sapiens glutamate receptor,
metabotropic 1 variant protein.
Length = 901
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 158 LCFFSLSAKPTTTSC 114
+C F+L AKPTTTSC
Sbjct: 638 VCPFTLIAKPTTTSC 652
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,268,560
Number of Sequences: 237096
Number of extensions: 302924
Number of successful extensions: 4334
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4329
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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