Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30685
(614 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 26 0.29
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 25 0.67
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 24 0.88
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 1.2
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 24 1.2
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 24 1.2
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 3.6
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 3.6
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 8.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 8.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 8.2
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 25.8 bits (54), Expect = 0.29
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1
Query: 353 VFALVAVPSYVWYAYTPLEH 294
+F ++V YV YA++P++H
Sbjct: 139 IFTYLSVTCYVTYAWSPIDH 158
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 24.6 bits (51), Expect = 0.67
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 339 YERE-YNILVMDLLGPSLEDLFNFCTRQFTIK 431
Y R+ YN+ M G ++EDL +FC +++K
Sbjct: 422 YSRDSYNLAGM---GETIEDLLHFCRTMYSMK 450
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 24.2 bits (50), Expect = 0.88
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 348 EYNILVMDLLGPSLEDLFNFCTRQFTIKTVLMLADQM 458
+Y ++ DL LE F F ++ TIK LA+ +
Sbjct: 158 KYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENL 194
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 206 HRNWRGGGSES*IYKGPTP 262
H N R GGS+ YK P P
Sbjct: 304 HDNQRTGGSQILTYKNPKP 322
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 206 HRNWRGGGSES*IYKGPTP 262
H N R GGS+ YK P P
Sbjct: 305 HDNQRTGGSQILTYKNPKP 323
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 206 HRNWRGGGSES*IYKGPTP 262
H N R GGS+ YK P P
Sbjct: 305 HDNQRTGGSQILTYKNPKP 323
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 261 PQLLYESRVYKMLQGGVGI 317
PQ+ + SR+Y+M++ G+GI
Sbjct: 670 PQV-HASRIYRMIKLGLGI 687
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = -2
Query: 256 RAFVDSTFTATSSPVPMLIAKYISPNDPPPIFFDTLYFP 140
+ FV S P+L + PPP + D Y P
Sbjct: 2 KGFVRQVKQEADSTSPLLTPPHNPAYSPPPSYCDPWYNP 40
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 360 LVMDLLGPSLEDLFNFCTRQFTIKTVLMLADQ 455
LV L P + + +C RQFT L++ ++
Sbjct: 69 LVAGKLKPKRQFICKYCNRQFTKSYNLLIHER 100
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 342 EREYNILVMDLLGPSLE 392
ERE N+L+ DL G + +
Sbjct: 18 ERERNVLIFDLGGGTFD 34
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 580 ASPKSIMYSLLQCRPMP 530
+SP+SI L CR +P
Sbjct: 64 SSPRSISEDPLNCRDLP 80
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 335 RLRARIQYPGHGP 373
R R +PGHGP
Sbjct: 743 RSRQNSSFPGHGP 755
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 600 EGLCISSRVQSRSCTAC 550
EG CI + C AC
Sbjct: 79 EGSCIIDKTHRNQCRAC 95
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 600 EGLCISSRVQSRSCTAC 550
EG CI + C AC
Sbjct: 79 EGSCIIDKTHRNQCRAC 95
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,479
Number of Sequences: 336
Number of extensions: 3917
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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