Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30684
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL023811-1|CAA19422.2|  947|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z79602-4|CAI79200.1|   72|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical
           protein T12D8.5 protein.
          Length = 135

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +3

Query: 477 CRGRVSWRYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQ 653
           CR     +  K++ +  K  + +    L  HN H +AP+  PE  +E     P+R+ ++
Sbjct: 49  CRIESETQSNKERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYMEAGQVPPMRKASR 107


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
 Frame = +2

Query: 587 AETETRTQARN----TKPGSPKTNEPTSQREGLR---DQNLTVG*KSRRNHAKDDKHRSQ 745
           A + TR+QA++    T P SP  +   S    L+   D+      K R++H+K  KHRS+
Sbjct: 379 ARSRTRSQAKSSSTLTWPLSPSRSRSNSNERNLKEKKDRKKKKSEKKRKHHSKSRKHRSK 438


>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 213 ICQLDEYCSPETNRC 257
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 213 ICQLDEYCSPETNRC 257
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
            F57C7.1a protein.
          Length = 1209

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 573  PHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTA 740
            P  +A KP+P  K   + P P ++   PL++ D     +   K   A+ P T  +A
Sbjct: 1086 PKPQAKKPEPPQKKVAKKPAPQQKKKAPLSILDELLPDTPEKKPVMASVPTTSGSA 1141


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 549 PNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQS 695
           P+ L HH+ H  +P   P     +  P P  RT  P  +K      SQS
Sbjct: 314 PSSLQHHHHHRRSP---PLFHSPVYKPKPRSRTESPAALKAAAAAASQS 359


>AL023811-1|CAA19422.2|  947|Caenorhabditis elegans Hypothetical
           protein C51F7.1 protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
 Frame = +3

Query: 531 NRVKQYPNDLTHHNP----HAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSD 698
           N++  Y +   HH P    HA++    P      RNP P   T QP+     +T +S   
Sbjct: 677 NQILTYEDAPIHHGPTLLTHAQSLHV-PGTVARPRNPPPYESTFQPIFAVGPKTSSSPPP 735

Query: 699 KSQGATTPKT 728
           +SQ + T  T
Sbjct: 736 QSQPSLTAST 745


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +3

Query: 78  VCSCENVHGALEITEREMSGFVCVLILAGVASAQITLDGIRCGQLICQLDEYCS-PETNR 254
           + + EN+H    +T  EM GF+   +      A   LDG+   + +CQ     S PE   
Sbjct: 295 IMNLENLHPDFCLTFHEMIGFLDAQVYFKNIHANYCLDGVSFSESLCQFFNMSSLPEKCT 354

Query: 255 CAPCNVVCNKTHHNY 299
               NV  N     Y
Sbjct: 355 YIYGNVEINAGDEEY 369


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 189 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 326
           D   C ++ C+ +E+    TN C P  VVC+     +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 189 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 326
           D   C ++ C+ +E+    TN C P  VVC+     +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical
           protein W02D9.3 protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 498 RYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDP 635
           ++L  +   +KN  K+   D     P+ + P PKP +   + +P+P
Sbjct: 207 KFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEP 252


>AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK616.8 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +2

Query: 581 RSAETETRTQARNTKPGSPKTNEPTSQREGLRDQN 685
           + ++++T +  +NT+ G P    P+S  +G  D+N
Sbjct: 176 KKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKN 210


>Z79602-4|CAI79200.1|   72|Caenorhabditis elegans Hypothetical
           protein K09E9.4 protein.
          Length = 72

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 600 PELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPK 725
           PE+++EI +PD  +   +  ++K    +T++S    G + PK
Sbjct: 27  PEIEVEINDPDAAKLAERMSDMKAHCDQTAESQNQPGPSPPK 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,893
Number of Sequences: 27780
Number of extensions: 330152
Number of successful extensions: 1096
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)