Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30682
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 30 0.99
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 2.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 2.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.0
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 28 4.0
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical pr... 28 5.3
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm rece... 27 7.0
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 27 7.0
Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 9.2
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 27 9.2
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 27 9.2
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T ++ T+ P + TTT T PT T++ T+ T AP + T TTT
Sbjct: 148 TETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T ++ T+ P + TTT T PT T++ T+ T P + T TTT
Sbjct: 169 TTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTT 228
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T ++ T+ P + TTT T PT T++ T+ T P + T TTT
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T + T+ E + TTT T PT T++ T+ T P + T TTT
Sbjct: 134 TTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 193
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T ++ T P + TTT T PT T++ T+ T P + TTT
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTT 200
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T ++ T+ P + TTT T PT T++ T+ T P + TTT
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T + T P ++ + TTT T T T+ T+ T E + T TTT
Sbjct: 99 TTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +3
Query: 357 ELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 536
E+T + +T+ + + TTT T PT T+S TS T + TS T
Sbjct: 51 EVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTS-TTSTTTTTTPTTTTSTT 109
Query: 537 TT 542
TT
Sbjct: 110 TT 111
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 354 LELTNASSLITS-VALAPVED---SIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDS 521
L LT +I S +A +P D + TTT T E T T+ +T+ T P S
Sbjct: 11 LLLTYKLDVINSCIATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTT-TPTTTS 69
Query: 522 ITSFTTT 542
TS TTT
Sbjct: 70 TTSTTTT 76
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
T S+ T+ P + + TTT + T T++ T+ T + T TTT
Sbjct: 66 TTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTT 125
Query: 543 AGAAP 557
P
Sbjct: 126 TTMPP 130
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 30.3 bits (65), Expect = 0.99
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 357 ELTNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSS 482
E T LI AL P E SI TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 536
T ASS +TS A ++ + TTT A+T + TS+ +TS T+ P +T+
Sbjct: 225 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 283
Query: 537 TTAGAA 554
TT +
Sbjct: 284 TTTATS 289
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 363 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFT 536
T ASS +TS A ++ + TTT A+T + TS+ +TS T+ P +T+
Sbjct: 207 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 265
Query: 537 TTAGAA 554
TT +
Sbjct: 266 TTTATS 271
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 432 TTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTA 545
TT+ A+T EP+ TS++ TS + +PV ++TS ++++
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTSSSSSS 469
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 360 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTT 539
+ + S+ T+ V ++ S TTT +T + ++S T T +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTS-TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTS 329
Query: 540 TAGAA 554
TA +
Sbjct: 330 TASTS 334
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 432 TTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTA 545
TT+ A+T EP+ TS++ TS + +PV ++TS ++++
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTSSSSSS 469
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 360 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTT 539
+ + S+ T+ V ++ S TTT +T + ++S T T +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTS-TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTS 329
Query: 540 TAGAA 554
TA +
Sbjct: 330 TASTS 334
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 429 TTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
TTT T PT T++ T+ T P + T TTT
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 127
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 429 TTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTT 542
TTT T PT T++ T+ T P + T TTT
Sbjct: 97 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 134
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 113 YGFRFNNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWG 223
YG+ +NN+ + NY+ NS+ RSC S+S G
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY-----RSCWRQSYSCSG 342
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +3
Query: 369 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLAPVEDSITSFTTTAG 548
A ++I + E SI T T +T PT T+S ITS T AP S S + A
Sbjct: 316 APTVIKPYPPSSTESSIDFTTATESTST----PTSTTSDITSTTTAPTSASTYSTDSWAT 371
Query: 549 A 551
A
Sbjct: 372 A 372
>Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical
protein W01C9.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 523 IESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATE 386
I++ TGAS+T + G+ IV P+ V +E+ T + ATE
Sbjct: 151 IQNKTGASITSITAGYARAGAPFIV--PSAVSKAGVETMTKSLATE 194
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 411 DSIGSFTTTAGAATIVLEPTDTSSLITSVTLAP 509
D + + TTT+ T T T + T++TLAP
Sbjct: 52 DPVSTTTTTSSTTTTTTTTTTTEATTTTLTLAP 84
>Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical
protein ZK262.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 83 SCSGFCSDSFYGFRFNNHNFFCNYFWL 163
SC F + S G N N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 329 CSGFYFNSFRAHQCLVINYFGSTCSR*RLNW-IIYNHSRCCNN 454
C G +SFR C V G TC + W + ++ C +N
Sbjct: 135 CDGLISSSFRFDACGVCGGRGDTCDNGKFIWKVSEEYTACASN 177
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +3
Query: 360 LTNASSL---ITSVALAPVEDS-----IGSFTTTAGAATIVLEPTDTSSLITSVTLAPVE 515
L NASS +TS AP +S + S TTT + T +E T T+ + S + PV+
Sbjct: 398 LLNASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVK 457
Query: 516 DS 521
+
Sbjct: 458 ST 459
>AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm
receptor protein 79 protein.
Length = 358
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 128 NNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWGCYNYSFRYSICENFRTQILWRF 289
N NF C W+ CGYS SL ++FR+ + N + WRF
Sbjct: 85 NRFNFPCLGVWM--LLATNWICCGYSILSLNA--QFAFRWIVMSNSGKNLFWRF 134
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = -2
Query: 553 AAPAVVVNDVIESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVIND 374
A + V+ +++ TE+ + T A+P N + S+T +AT I
Sbjct: 42 ATESTTVSTSTTATSSTPTTEIFSSNSPSTETTTCASPTTSTNGHLTSTTDGAATSPIKT 101
Query: 373 EAL 365
E L
Sbjct: 102 EVL 104
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 450 TIVLEPTDTSSLITSVTLAPVEDSITSFTTTAGAAPI 560
T +L P D SL++S+T P + + T T A I
Sbjct: 940 TYLLSPADYQSLVSSITFRPTQGTATLSTAYKKAIEI 976
>Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical
protein T05C12.3 protein.
Length = 309
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 523 IESSTGASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATE 386
I+S TGASVT + G+ IV P+ V +E T + ATE
Sbjct: 151 IQSKTGASVTSITAAYARSGAPFIV--PSAVSKAGVEIMTKSLATE 194
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 523 IESSTGASVTEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 383
I STG++ T V SVGS T A+P+ + TG++ T V
Sbjct: 268 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 315
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 523 IESSTGASVTEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 383
I STG++ T V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 523 IESSTGASVTEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 383
I STG++ T V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 360 LTNASSLITSVALAPVEDSIGSFT---TTAGAATIVLEPT 470
+TN SSL+T++ L + + GS T + T+++EPT
Sbjct: 1 MTNFSSLLTTIFLCIISSATGSGTIELLISSPQTVLVEPT 40
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 360 LTNASSLITSVALAPVEDSIGSFT---TTAGAATIVLEPT 470
+TN SSL+T++ L + + GS T + T+++EPT
Sbjct: 1 MTNFSSLLTTIFLCIISSATGSGTIELLISSPQTVLVEPT 40
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 366 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVT 500
N+SS L P S+GS + ++ AA+ + SSLI S T
Sbjct: 90 NSSSSSVGAGLTPGNGSVGSTSNSSSAASSIQNIGLNSSLINSNT 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,407,087
Number of Sequences: 27780
Number of extensions: 189927
Number of successful extensions: 716
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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