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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30673
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    32   0.006
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    32   0.006
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    32   0.006
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    32   0.006
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.091
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.091
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.091
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.091
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.0  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 247 YITIVRILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           Y+   + LG      HP+ +GG VW+      V HW +   +  I C
Sbjct: 177 YMKKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 223


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 247 YITIVRILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           Y+   + LG      HP+ +GG VW+      V HW +   +  I C
Sbjct: 491 YMKKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 537


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 247 YITIVRILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           Y+   + LG      HP+ +GG VW+      V HW +   +  I C
Sbjct: 724 YMKKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 770


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 247 YITIVRILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           Y+   + LG      HP+ +GG VW+      V HW +   +  I C
Sbjct: 724 YMKKNKTLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 770


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 232 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           R LG      HP+ +G  VW+      + HW +   +  I C
Sbjct: 756 RNLGAACGRIHPVGSGPMVWYQMFEYAIGHWLQKATEHVIGC 797


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 232 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           R LG      HP+ +G  VW+      + HW +   +  I C
Sbjct: 756 RNLGAACGRIHPVGSGPMVWYQMFEYAIGHWLQKATEHVIGC 797


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 232 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           R LG      HP+ +G  VW+      + HW +   +  I C
Sbjct: 756 RNLGAACGRIHPVGSGPMVWYQMFEYAIGHWLQKATEHVIGC 797


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 232 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 107
           R LG      HP+ +G  VW+      + HW +   +  I C
Sbjct: 756 RNLGAACGRIHPVGSGPMVWYQMFEYAIGHWLQKATEHVIGC 797


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 372 RSKSAFSELEPFSGSDFDFLTEGTTPSS 289
           RS SAFS ++P S  D+  + +  +P+S
Sbjct: 149 RSSSAFSYIKPSSERDYFSVKKLPSPAS 176


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 490  TVRLRPHHSD*RMAKQYNLH 549
            T +L+PH SD      Y +H
Sbjct: 1413 TFKLKPHESDVEPIHGYTIH 1432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,087
Number of Sequences: 336
Number of extensions: 3927
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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