Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30661
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-2|AAK68566.1|  169|Caenorhabditis elegans Hypothetical ...    76   3e-14
Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical p...    31   0.94 
Z47358-10|CAA87438.1|  507|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z47356-9|CAA87420.1|  507|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom...    29   5.0  
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ...    28   6.7  
AC006698-1|AAF39993.3|  398|Caenorhabditis elegans Hypothetical ...    28   6.7  

>AC084158-2|AAK68566.1|  169|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.21 protein.
          Length = 169

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 38/102 (37%), Positives = 65/102 (63%)
 Frame = +3

Query: 246 KFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPDWDLK 425
           +FR++KP D+A+    + D +  +++ E+ + L+    +  +  +D+  LAP+K DWDLK
Sbjct: 67  EFRNHKP-DDAVGTQNV-DMDLDIVQREITEHLKDVLHEKAIDSVDLAMLAPKKIDWDLK 124

Query: 426 RDVAKKLERLERKTQRAIAELIWDRLKHGNEDNLSAMITMTA 551
           RD+  KL++LER+TQ+A+A +I  RL  G  D L+A +   A
Sbjct: 125 RDIESKLQKLERRTQKAVATIIRQRLAEGKGD-LAATVNAAA 165


>Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical
           protein M162.3 protein.
          Length = 347

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 386 YVEILENHLFFTSLQQIFYFFFYHCWF 306
           Y +++E  L +TS+  + ++ FY CWF
Sbjct: 141 YADVIEKKLAYTSISFVLFYGFYICWF 167


>Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 383 VEILENHLFFTSLQQIFYFFFYHCWFCII 297
           +EIL    + + L    Y FFYH W+C I
Sbjct: 445 LEILSLFFYVSVLFTTMYLFFYHDWYCAI 473


>Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 383 VEILENHLFFTSLQQIFYFFFYHCWFCII 297
           +EIL    + + L    Y FFYH W+C I
Sbjct: 445 LEILSLFFYVSVLFTTMYLFFYHDWYCAI 473


>Z47358-10|CAA87438.1|  507|Caenorhabditis elegans Hypothetical
           protein ZK1307.8 protein.
          Length = 507

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 267 QDEALQESKLNDAEPTVIEEEV--KDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRDVAK 440
           + +AL++SKL D EP   E  +   D ++   EK V +D +       +  W+  ++  K
Sbjct: 156 EGQALRDSKLKDVEPLRQERALLEPDRVKFEGEKKVAEDAERKLQDEHRNQWESVKNEKK 215

Query: 441 KLERLE 458
           KL   E
Sbjct: 216 KLRAAE 221


>Z47356-9|CAA87420.1|  507|Caenorhabditis elegans Hypothetical
           protein ZK1307.8 protein.
          Length = 507

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 267 QDEALQESKLNDAEPTVIEEEV--KDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRDVAK 440
           + +AL++SKL D EP   E  +   D ++   EK V +D +       +  W+  ++  K
Sbjct: 156 EGQALRDSKLKDVEPLRQERALLEPDRVKFEGEKKVAEDAERKLQDEHRNQWESVKNEKK 215

Query: 441 KLERLE 458
           KL   E
Sbjct: 216 KLRAAE 221


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +3

Query: 261 KPQDEALQES--KLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDI 386
           K +DE + +S  +L D +  + E++ K L+  GK++V+  D+DI
Sbjct: 402 KQKDEQIMKSMLELEDMKKLLEEKDEKILMHVGKQRVMKFDMDI 445


>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
           homolog) family protein 6 protein.
          Length = 1186

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = +3

Query: 264 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRDVAKK 443
           PQ    +  K   ++P + E   K +  AGK K V+ D +  S+A      D   D   +
Sbjct: 126 PQSTPKRGGKKKISKPLLAENTPKSVKMAGKSKKVIPDGEAVSMAGVLDKMDKIMDGEGE 185

Query: 444 LERLERKTQRA 476
            +R+  KT  A
Sbjct: 186 RKRIVEKTTGA 196


>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
           protein K09F6.6 protein.
          Length = 1010

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
 Frame = +3

Query: 237 PKPK-FRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPD 413
           P+P+ F  Y+  D+ ++        P +          AG+ K+V + L +  L PR  +
Sbjct: 588 PRPEDFPPYEIDDDMMENGVDATTTPRITRRR------AGQNKIVKKKLVLEPLTPRSTE 641

Query: 414 --WDLKR-DVAKKLERLERKTQRAIAELIWDRLKHGNEDNLSAMITMTANRPTITD 572
              +LKR  ++++LER    +  +  + + + ++ G+  N+   +       T+TD
Sbjct: 642 SVSNLKRMKISERLERHPPASNLSAIDQLKEAVRCGSILNMGKAVYQGYENETLTD 697


>AC006698-1|AAF39993.3|  398|Caenorhabditis elegans Hypothetical
           protein W10C4.1 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -2

Query: 784 NSLEFFYYTTDFPPTVLHNSTVMPLVLIPLGILSFRSQLHLIFKSTCLLALNACFKFLM 608
           ++LE F YT  FPP  L       L ++ L    F S+ ++    TCL   +  F  L+
Sbjct: 18  SNLEAFLYTVLFPPICLFGVVGNALTILVLVNNDFMSRANIFL--TCLAVCDVSFLILI 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,975
Number of Sequences: 27780
Number of extensions: 279399
Number of successful extensions: 862
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)