Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30658
         (792 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger) fa...    32   0.38 
At3g09070.1 68416.m01066 glycine-rich protein similar to hypothe...    30   1.5  
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05...    30   1.5  
At3g56760.1 68416.m06313 calcium-dependent protein kinase, putat...    30   2.0  
At5g45000.1 68418.m05518 Toll-Interleukin-Resistance (TIR) domai...    29   2.7  
At4g08113.1 68417.m01331 myosin heavy chain-related similar to M...    29   2.7  
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic...    29   4.7  

>At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 308

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +2

Query: 281 STSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEK 421
           S    GFDD V  P+A+A   +  LD + + S P  V+++  EE ++
Sbjct: 88  SLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDE 134


>At3g09070.1 68416.m01066 glycine-rich protein similar to
           hypothetical protein GB:AAD32765 [Arabidopsis thaliana]
          Length = 685

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 233 AGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 331
           A ++  +E  APPP +   TNG  D V +P  S
Sbjct: 413 ADMQFPVEEPAPPPPVVNQTNGVSDPVIIPGGS 445


>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
           PF05794: T-complex protein 11
          Length = 1131

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 224 NQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTV 391
           NQLA        S+P  ++S+S++   D + V  ++  + + L DD P  S P+ V
Sbjct: 588 NQLAHFFSPSPASSPVQSVSSSSSRSKDSIGVEGSNRVNRSLLKDDTPPSSGPSRV 643


>At3g56760.1 68416.m06313 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium/calmodulin-dependent
           protein kinase CaMK3 [Nicotiana tabacum]
           gi|16904226|gb|AAL30820
          Length = 577

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = +2

Query: 218 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFK 397
           +Q++   + +E+E +    +    ++GF  +   P  S F  +  +  + + STP  +FK
Sbjct: 11  QQSKNLPISNEIEETPKNSSQKAKSSGFPFYSPSPLPSLFKTSPAVSSSSVSSTPLRIFK 70

Query: 398 QEREEPEKIK 427
           +    P   K
Sbjct: 71  RPFPPPSPAK 80


>At5g45000.1 68418.m05518 Toll-Interleukin-Resistance (TIR)
           domain-containing protein domain signature TIR exists,
           suggestive of a disease resistance protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 302 DDFVEVPSASAFDANGLLD-DAPLGSTPTTVFKQEREEPEKIKIWRE 439
           D+ V +P     DA      + P G     + +  R EPE+IK W+E
Sbjct: 98  DELVVIPIFYRLDATNCKRLEGPFGDNFRNLERDYRSEPERIKKWKE 144


>At4g08113.1 68417.m01331 myosin heavy chain-related similar to
           Myosin heavy chain, skeletal muscle, extraocular
           (MyHC-eo) (SP:Q9UKX3)  {Homo sapiens}
          Length = 764

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 179 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTS 289
           +PEV+PAA+ +  +Q   +  E+ +E +A  P  + S
Sbjct: 383 QPEVNPAAELVVSDQRVASPREERMEPAAATPEAAAS 419


>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
           to dynamin like protein 2a (ADL2a) [Arabidopsis
           thaliana] GI:19032337; supported by cDNA gi:19032336
          Length = 808

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = +2

Query: 605 GSESSVEEGNEWARVSELCDFGPRRGRDVARLRSIVLQLKQAGSRPN 745
           GS+SS +     A V    DF PR G D+   R +VLQL Q  SR N
Sbjct: 66  GSQSSGKSSVLEALVGR--DFLPR-GNDICTRRPLVLQLLQTKSRAN 109


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,854,229
Number of Sequences: 28952
Number of extensions: 360403
Number of successful extensions: 1180
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)