Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30651
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 115 5e-27
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 51 1e-07
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 48 1e-06
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 47 3e-06
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 45 9e-06
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 45 1e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 44 2e-05
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 43 5e-05
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 42 8e-05
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 41 1e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 41 1e-04
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 40 2e-04
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 40 3e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 40 3e-04
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 39 6e-04
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 38 0.001
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 38 0.001
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 38 0.002
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 37 0.002
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 37 0.003
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 36 0.004
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 36 0.005
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 36 0.005
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 35 0.009
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.016
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 33 0.038
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 32 0.066
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 32 0.066
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 32 0.066
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 32 0.087
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 31 0.20
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 30 0.27
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 29 0.46
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 29 0.46
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 0.46
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 28 1.1
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 27 1.9
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 27 1.9
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 27 3.3
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 3.3
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 3.3
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 27 3.3
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 26 4.3
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 5.7
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 5.7
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.7
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 5.7
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 25 7.6
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 7.6
SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 10.0
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 115 bits (277), Expect = 5e-27
Identities = 64/183 (34%), Positives = 96/183 (52%)
Frame = +1
Query: 58 ALEAQLQVRFITKQEQYAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVIFDFLV 237
A Q+QVRF T+ E AV D+P + ++ L+ ++N +LK EK FDFLV
Sbjct: 6 APSGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYGLSQIVNHLLKT-----EKPTPFDFLV 60
Query: 238 CGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSG 417
G+LL +L E++ + G+STE L++EY++ P HDDW+S +Q S IL+
Sbjct: 61 QGQLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTS 120
Query: 418 SYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN 597
SYD +W G+ K G S +K+ SW +F++ S DQ WV P +
Sbjct: 121 SYDGIARVWDKSGEIKFQSTGCGSSLKSASW---HIPNQSFLTASLDQKIFHWVIEEPES 177
Query: 598 SVD 606
+D
Sbjct: 178 MLD 180
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 51.2 bits (117), Expect = 1e-07
Identities = 28/99 (28%), Positives = 54/99 (54%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFV 543
H D V + S+ ++SGS D ++ +W G ++ + GHT PV +V + D+ +
Sbjct: 352 HTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIR---DRGLVL 408
Query: 544 SGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 660
SGS D T + +W++ N+ C+ T+ H ++ L+++
Sbjct: 409 SGSDDST--IKIWSLETNT--CLHTFSAHIGPVQSLALA 443
Score = 49.6 bits (113), Expect = 4e-07
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQGDQATF 540
H D V +Q + + SGSYD ++ +W+ ++A + GH+S V + Q DQ
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCL-----QFDQCKL 326
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLS 654
+SGS D+T + +WN R S +C+ GH + CL+
Sbjct: 327 ISGSMDKT--IRIWNY-RTS-ECISILHGHTDSVLCLT 360
Score = 31.5 bits (68), Expect = 0.12
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
H + V + A ++SG++D + +W + H L H+ PV +V+ GD
Sbjct: 473 HIEGVWEIAADHLRLISGAHDGVVKVWEACECVHTLK--NHSEPVTSVAL----GD-CEV 525
Query: 541 VSGSHDQTAILWVWN 585
VSGS D LW++N
Sbjct: 526 VSGSEDGKIYLWLFN 540
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 48.0 bits (109), Expect = 1e-06
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 364 HDDWVS--AVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQA 534
H +VS A+ S + LS S+D ++ +W KG+ GHTS V +VS D
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVS---ISPDNR 118
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 660
VSGS D+T + +WN+ N IT GH + C+ S
Sbjct: 119 QVVSGSRDKT--IKIWNIIGN-CKYTITDGGHSDWVSCVRFS 157
Score = 31.5 bits (68), Expect = 0.12
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Frame = +1
Query: 364 HDDWVSAVQA---HSSWILSGSYDNSLHIWS------TKGQHKLAIPGHTSPVKAVSWVS 516
H WV+++ + +LSGS D S+ +W+ G + + GH+ V + +S
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA-LS 72
Query: 517 FQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
F A +S S D+T LW +C + GH + +S+S D
Sbjct: 73 FDSHYA--LSASWDKTIRLW----DLEKGECTHQFVGHTSDVLSVSISPD 116
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 46.8 bits (106), Expect = 3e-06
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+ SGS DN++ IW+ K + L + GHT+P+ V W G Q S S+D+T +W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW----GGQNWIYSSSYDKTIRIW-- 295
Query: 583 NVPRNSVDCMITYRGHDKGIECLSVSAD 666
C+ +GH + LS+S +
Sbjct: 296 --DAKDGKCLHILKGHAARVNHLSLSTE 321
Score = 35.9 bits (79), Expect = 0.005
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
S ++S S D +L +W + + K +PGH V AV W D SG D+ +
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW---SPDGQRVASGGADKAVRI 499
Query: 574 W 576
W
Sbjct: 500 W 500
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 564
+WI S SYD ++ IW K G+ + GH + V +S + SG++D T
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS----LSTEHVLRSGAYDHT 332
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 45.2 bits (102), Expect = 9e-06
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Frame = +1
Query: 349 QDCLMH-DDWVSAVQ--AHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSF 519
Q ++H DD V+ V +I +GS D + IW++ G + GH V + V+F
Sbjct: 410 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYS---VAF 466
Query: 520 QGDQATFVSGSHDQTAILW----VWNVP----RNSVDCMITYRGHDKGIECLSVSADG 669
D VSGS D T LW V NV + C T+ GH I ++VS DG
Sbjct: 467 SPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG 524
Score = 42.3 bits (95), Expect = 6e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQA 534
H D++ +V WI+SGS D ++ WS H +L + GH + V +V+ VS G
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA-VSPNGH-- 567
Query: 535 TFVSGSHDQTAILW 576
F +GS D A +W
Sbjct: 568 CFATGSGDLRARIW 581
Score = 32.3 bits (70), Expect = 0.066
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
A ++ +G D + IW + K ++L + GH + ++ F D T VSGS
Sbjct: 341 AFSPDGKYLATGVEDQQIRIWDIAQKRVYRL-LTGHEQEIYSLD---FSKDGKTLVSGSG 396
Query: 556 DQTAILW 576
D+T LW
Sbjct: 397 DRTVCLW 403
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 44.8 bits (101), Expect = 1e-05
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 364 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQA 534
H D+V AV S W LSGS D S+ W + GQ L GH + V + V F D
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVIS---VCFSPDGR 593
Query: 535 TFVSGSHDQTAILW 576
F SGS D A +W
Sbjct: 594 QFASGSGDLRARIW 607
Score = 42.7 bits (96), Expect = 5e-05
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
A+ + +I GS D + +WS G + GH V + ++F D + +SGS D+
Sbjct: 450 AISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYS---IAFSPDSSILLSGSLDK 506
Query: 562 TAILWVWNVPRN--------SVDCMITYRGHDKGIECLSVSAD 666
T +W R+ C TY GH + ++VS D
Sbjct: 507 TIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPD 549
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
A ++++G+ D + +W Q + GH + ++ F + VSGS D
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLD---FSHNGRFIVSGSGD 423
Query: 559 QTAILW 576
+TA LW
Sbjct: 424 RTARLW 429
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
H D V + + ++SGSYD+S+ IW + G+ + GH+ + + V ++ ++
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYS---VLYEPERNIC 562
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
+SGS D++ + VW++ + C GHD + L+V
Sbjct: 563 ISGSMDKS--IRVWDLSTGT--CKYVLEGHDAFVTLLNV 597
Score = 39.1 bits (87), Expect = 6e-04
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWV--------- 513
H + V AV+ H + ++SGS D ++ +W+ K + GH S ++ + +
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHG 449
Query: 514 --SFQGDQATFVSGSHDQTAILWVWNVPRNS 600
+ DQ VSGS D T L VW +P+N+
Sbjct: 450 VEIVEPDQPYIVSGSRDHT--LRVWKLPKNT 478
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
HD +V+ + + ++SGS D+++ IW G+ + +P ++ + SF D+
Sbjct: 588 HDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYIS-----SFVSDEHKI 642
Query: 541 VSGSHDQTAILW 576
+SG +D + LW
Sbjct: 643 ISG-NDGSVKLW 653
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 42.7 bits (96), Expect = 5e-05
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
I +GS+D+++ W+ G+ + GHT VK + + +G +SGS D + I VW
Sbjct: 105 IYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEG---LLLSGSTDASLI--VW 159
Query: 583 NVPRNSVDCMITYRGHDKGIECLS 654
+V + GH +GIEC++
Sbjct: 160 DVSSQPSRLLYKLTGHSRGIECIT 183
Score = 26.2 bits (55), Expect = 4.3
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +1
Query: 364 HDDWVSAVQA--HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H D+V + +LSGS D SL +W Q + T + + ++ Q +
Sbjct: 131 HTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPNTDI 190
Query: 538 FVSGSHDQTAILW-VWNVPRNSVDCMITYRGHDKGIECL 651
F + + + W + V + ++ + GH + CL
Sbjct: 191 FWTCGSESSIRCWHITKVGGSQLE-EEGFWGHQSNVYCL 228
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/95 (28%), Positives = 44/95 (46%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
AVQ +++GS D+++ +W L H K V +S D+ TF SGS D
Sbjct: 296 AVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHK--KTVRALSLHPDEFTFASGSSDN 353
Query: 562 TAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
+ W P + M + GH+ + LS+++D
Sbjct: 354 ---IKHWKFPEGAF--MGNFEGHNAIVNTLSINSD 383
Score = 32.7 bits (71), Expect = 0.050
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQA 534
H WV V + W +G+ D ++ IW G KL + GH + V+ ++ VS
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLA-VS-PRHPY 219
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
F G + ++ W++ N V + Y GH G+ L +
Sbjct: 220 LFSCG---EDKMVKCWDLETNKV--IRHYHGHLSGVYALKL 255
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 41.1 bits (92), Expect = 1e-04
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +1
Query: 373 WVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSG 549
W + S + SGS D ++ IW+ Q + + GHT + + ++S QG Q VS
Sbjct: 511 WACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYIS-QGTQV--VSA 567
Query: 550 SHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+ D ++ VW++ +S +C+ T H+ + L+ DG+
Sbjct: 568 AAD--GLVKVWSL--SSGECVATLDNHEDRVWALASRFDGS 604
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
S++LSGS D ++ +W+ K + + IP S V+A+ WV+ Q ++ + + W
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTAGEGNLILAW 260
Query: 577 VW 582
W
Sbjct: 261 DW 262
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Frame = +1
Query: 403 WILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVSW--VSFQGDQATFVSGSHDQ 561
W+ +G+ DN++ +W+ + + GHT+ V AV+ + G S S D+
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDR 437
Query: 562 TAILWVWNVPRNSVD----CMITYRGHDKGIECLSVSADG 669
T + N D + T + HD+ + + VS DG
Sbjct: 438 TLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDG 477
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 LHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDC 609
+ + ST G + GHT V + D +G+ D T LW N+ N C
Sbjct: 346 IDVISTDGTQVFGVLEGHTDIVLTLD---SSEDGVWLATGAKDNTVRLWNLNIEDNVYKC 402
Query: 610 MITYRGHDKGIECLSV 657
+ + GH + +++
Sbjct: 403 IHVFTGHTASVTAVAL 418
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 41.1 bits (92), Expect = 1e-04
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
+ ++LS S D S +WS + L A GHT PV V++ F G F + SHDQTA L
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPF-GHY--FATASHDQTAQL 447
Query: 574 WVWNVPRNSVDCMITYRGHDKGIECLS 654
W + + + + GH ++C++
Sbjct: 448 W----SCDHIYPLRVFAGHLSDVDCVT 470
Score = 38.7 bits (86), Expect = 8e-04
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 373 WVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSG 549
W A + + S+D + +WS + L + GH S V V+ F + A ++G
Sbjct: 425 WDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVT---FHPNSAYVLTG 481
Query: 550 SHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
S D+T L W+V R + + GH + + ++++ DG+
Sbjct: 482 SSDKTCRL--WDVHRG--HSVRVFNGHTQPVTAVAIAPDGH 518
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 40.3 bits (90), Expect = 2e-04
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 328 RFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAV 504
RFPA QD D V VQ ++SGS D ++ +W + L + GH+ +V
Sbjct: 210 RFPAD--QDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSG---SV 264
Query: 505 SWVSFQGDQATFVSGSHDQTAILWVW 582
+ F + VSGS D T I+W W
Sbjct: 265 LCLDFCRRRNLLVSGSSDSTIIIWDW 290
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKLAIP-GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
++SGS D+++ IW + + L + GHT V V VS + +S S D TA +W
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVV-VS----ENYIISSSRDHTARVWRL 330
Query: 583 NVPRNSVDCMITYRGHDKGIECLSVSA 663
+ + CM RGH + + S+
Sbjct: 331 DATSPAEACMHVLRGHLASVNSVQYSS 357
Score = 33.9 bits (74), Expect = 0.022
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVSWVSFQGD 528
H D V V ++I+S S D++ +W + GH + V +V + S G
Sbjct: 302 HTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTG- 360
Query: 529 QATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIEC 648
V+ S D+T L W++ + C+ H +GI C
Sbjct: 361 --LIVTASSDRT--LRTWDI--TTGHCIRIIHAHQRGIAC 394
Score = 33.5 bits (73), Expect = 0.029
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H+D + V+ + I+SG YD ++ IW +T QH + H S V + F D
Sbjct: 428 HEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVL---HNSRNSRVFGLQF--DHRR 482
Query: 538 FVSGSHDQTAILWVWNVPRNSVDC 609
++ +H ++W ++ + +DC
Sbjct: 483 IIACTHSSEILVWNFD---DGLDC 503
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+LSGS DN + IW L GH P++ +S F D +F+S S D+T LW
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLS---FSQDGRSFLSTSFDKTIKLW 337
Score = 29.1 bits (62), Expect = 0.61
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 457 QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDK 636
+H GHT + + + G +SGS D + +W V + + T++GH +
Sbjct: 257 KHIFTWKGHTKGISCLRFFPISGH--LLLSGSMDNQ--IKIWEVYHDR-SLLRTFQGHAR 311
Query: 637 GIECLSVSADG 669
I LS S DG
Sbjct: 312 PIRDLSFSQDG 322
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 39.9 bits (89), Expect = 3e-04
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
S ++ S S D ++ IW + + + + GHT+ VS + F VSGS D+T +
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTN---YVSSIDFNPLGTLLVSGSWDET--V 162
Query: 574 WVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+WN+ + C+ H + I +S+SADG
Sbjct: 163 RIWNLQDGT--CLRMLPAHSEPIISVSISADG 192
Score = 33.1 bits (72), Expect = 0.038
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
+V + WI + S D ++ IWS + + + GH + V W + S S D
Sbjct: 61 SVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT---GSKYLASASDD 117
Query: 559 QTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+T +W + R SV C+ +GH + + + G
Sbjct: 118 KTIRIWDFE-KRCSVRCL---KGHTNYVSSIDFNPLG 150
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 379 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
SA +S I++GS+D++ +W+ GQ K + GH S V W + F++GS D
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKGHQSSV----WAVLALGEDIFITGSAD 157
Query: 559 QTAILW 576
+ +W
Sbjct: 158 KLIKIW 163
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 358 LMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
L H+D V ++ S S D + +W++ G+ + GHTS V +++++ +Q
Sbjct: 173 LAHNDCVRSLCQIPGGFASCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIH---NQQL 229
Query: 538 FVSGSHDQTAILW 576
S D+T +W
Sbjct: 230 IASCGEDRTIRIW 242
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 364 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQA 534
H D+V H WILS S D ++ IW+ + ++ +AI GH+ V +F +
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMC---AAFHPSED 150
Query: 535 TFVSGSHDQTAILW 576
VS S DQT +W
Sbjct: 151 LIVSASLDQTVRVW 164
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
HD V + H + L SG D +++W+ K + L ++ GH V+ + F +
Sbjct: 52 HDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCT---FHHEYP 108
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIEC 648
+S S DQT +W W S +C+ GH + C
Sbjct: 109 WILSCSDDQTIRIWNW----QSRNCIAILTGHSHYVMC 142
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 394 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
+S ++ +GS D ++++WS G + +PGH +V+ V F Q +S S D+T L
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYVLPGHEG---SVNHVDFHPHQDIILSCSSDRTIFL 336
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
++ +ILS S D +WS + + GH +P+ V + F F + SHD
Sbjct: 410 SISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG---YYFATASHD 466
Query: 559 QTAILWVWNVPRNSVDCMITYRGHDKGIECLS 654
QTA L W+V + + + GH ++C+S
Sbjct: 467 QTARL--WDVEHAAP--LRVFVGHQNDVDCVS 494
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 409 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+SGSYD ++ I++ + H + HT ++ V+ V F D SGS D LW
Sbjct: 289 VSGSYDKTIRIYNVREGHSRDVY-HTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLW 343
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 409 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNV 588
++GS D++L+++ + K A+ + V AV V F FVSGS+D+T + ++NV
Sbjct: 246 VAGSEDHNLYMYDMRNL-KRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKT--IRIYNV 302
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 376 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSG 549
V ++ AHS W+LSG + + ++ST+ Q + VS ++ G + +SG
Sbjct: 191 VYSLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLALHGSEKKVLSG 250
Query: 550 SHDQTAILWVWNVPRNSVDCMITY 621
S D+ +++ W++ N+ D + TY
Sbjct: 251 SWDK--MVYYWDL--NTGDAISTY 270
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Frame = +1
Query: 352 DCLM----HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQH---KLAIPGHTSPVKAV 504
DCL H V V H + ++SGSYDNS+ W G + GHT+ V A
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWA- 472
Query: 505 SWVSFQGDQATFVSGSHDQTAILWV 579
++F + T S +D LW+
Sbjct: 473 --LAFSPNGNTLASADNDGNVFLWI 495
Score = 29.9 bits (64), Expect = 0.35
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Frame = +1
Query: 316 EYLERFPAPTPQDCLM----HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AI 474
E+L + P D + H + +V AH L + S D S+ I+++ + + I
Sbjct: 269 EFLNQLYGPRKLDTITTISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYNSNTYNLVHVI 328
Query: 475 PG-HTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECL 651
G HT ++ V+W + + S D +++ + + +C GH+ ++C+
Sbjct: 329 DGFHTRSIRRVAWRPIE--RPVLAVASFD--SVVSINEKIDDDWECTAALEGHENEVKCI 384
Query: 652 SVSADGN 672
+ S +GN
Sbjct: 385 AWSCNGN 391
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 391 AHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTA 567
++ + + SG DN+L +W + L + H + VKA++W Q G+ D+T
Sbjct: 384 SNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGTADRT- 442
Query: 568 ILWVWNVPRNSV 603
+ +WN R S+
Sbjct: 443 -IKLWNTQRGSM 453
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQG-DQATFVSGSHDQTAIL 573
+++LSGS D+ + IW + LA + GH VK V++V++ D F S D T +
Sbjct: 441 TFVLSGSEDDKIRIWHRESGKLLATLSGH---VKCVNYVAYNPVDPYQFASAGDDNTVRI 497
Query: 574 W 576
W
Sbjct: 498 W 498
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 35.1 bits (77), Expect = 0.009
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+ SG DN + IW + K H + VKAV+W +Q + G+ D+ W
Sbjct: 319 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 376
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.3 bits (75), Expect = 0.016
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDN-SLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
AV + +GS D+ + +WS + GQ + GH PV ++S F + SGS
Sbjct: 431 AVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLS---FNSSGSLLASGSW 487
Query: 556 DQTAILW 576
D+T +W
Sbjct: 488 DKTVRIW 494
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 33.1 bits (72), Expect = 0.038
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 10/149 (6%)
Frame = +1
Query: 247 LLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQ---------AHS 399
L CA++ E +++ + Y+ +F P C+ D ++ + +
Sbjct: 147 LFCATVQISGNEIYIASASAFQQIYVWKFNYNNPPSCVSIDTYLVGHEGACFDLKFSSDG 206
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 579
++ S S D +L +WS + L G + V + VS D T LW
Sbjct: 207 RYLCSVSEDRTLRLWSIESSPFLIATGFGHSARVWRCVFLPNKEIATVS--EDLTLRLWT 264
Query: 580 WNVPRNSVDCMITYRGH-DKGIECLSVSA 663
WN ++ TY GH K I L VS+
Sbjct: 265 WN--DKTLTNTYTYTGHRGKHIWSLVVSS 291
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 32.3 bits (70), Expect = 0.066
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 340 PTPQDCLM---HDDWVSAVQAHSS---WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKA 501
P +DCL H D+V+++ H + LSGS D L +WS K + A+ +
Sbjct: 337 PVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK---EKAVSFWNELPEL 393
Query: 502 VSWVSFQGDQATFVSGS 552
++ V+F D ++G+
Sbjct: 394 ITAVAFSPDGGLAIAGT 410
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 32.3 bits (70), Expect = 0.066
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +1
Query: 310 EVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHT 486
+V L+ T +D + W S + +H I + +S+ + + G + ++ GHT
Sbjct: 132 DVSTLQEAYTFTMEDMIYSHAW-SPIASHCL-IATAYRSSSIRLCDMQSGSYTHSLSGHT 189
Query: 487 SPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCM 612
V AV W ++ SGS D T LW +S CM
Sbjct: 190 GNVLAVDWC--PKNEFVLASGSADGTCRLWDIRKVSSSFACM 229
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.066
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 453
H +S++Q S+ + SGSYDNS+ IW +
Sbjct: 535 HTAPISSLQFDSNHLYSGSYDNSVRIWDLR 564
Score = 29.5 bits (63), Expect = 0.46
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWS 447
H D+VS + S+I +GS D ++ +W+
Sbjct: 373 HSDYVSCLAIQDSFIATGSMDTTVRLWN 400
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.087
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 328 RFPAPTPQDCLMHDDWVSAVQAHSSW--ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVK 498
R P + +H+ + +Q S + SG DN+L +W + L HT+ VK
Sbjct: 236 RAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVK 295
Query: 499 AVSWVSFQ 522
A+ W Q
Sbjct: 296 AIGWSPHQ 303
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 30.7 bits (66), Expect = 0.20
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
H D V V I+S SYD +L +W ++ G + GH V + V+ +
Sbjct: 576 HTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYS---VTINPSRQQC 632
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITYRGH 630
+S D A + +WN+ S + + T GH
Sbjct: 633 ISAGTD--AKIRIWNL--ESGELLQTLHGH 658
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 463 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
K + GH V+ +S+ G AT SGS D+ LW
Sbjct: 184 KAVLRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRLW 221
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 29.5 bits (63), Expect = 0.46
Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Frame = +1
Query: 289 VSTEDTLEVEYLERFPAPTPQDCLMHDDWV-SAVQAHSSWILSGSYDNSLHIWSTK-GQH 462
+S D V+ + D H+D+V +A ++ ++SG YD ++ +W T+
Sbjct: 140 LSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTRIADP 199
Query: 463 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGI 642
++ H + V + Q +G + VW++ H K I
Sbjct: 200 EVMSFSHGEAIDVV--LPMQSGSTVISAGGPS----IKVWDLVAGRQTPTKKLSNHQKSI 253
Query: 643 ECLSVSAD 666
CL+++++
Sbjct: 254 TCLAMNSE 261
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+L+G + I+ + L A+ H PV + + TF+SGS D+T +W
Sbjct: 96 LLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYAN--TTFLSGSDDKTVKVW 151
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.46
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H + V+A+ H W+ + S D ++ +W + H SPV + QG+
Sbjct: 82 HTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIHPNQGELL- 140
Query: 538 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
S DQ+ + W++ NS + D + ++V +DG+
Sbjct: 141 ----SCDQSGRVRAWDLGENSCTHELIPE-EDVPMSSITVGSDGS 180
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVS 516
+SW + S+DNS+ +W G++K + + S + + W+S
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWIS 395
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
SW+ +G+ +L+IWS K G H P ++ + F D + S+D W
Sbjct: 89 SWLAAGTEKGNLYIWSLKSGALIYFFRAHYQP---LTILKFSNDGMVLFTASNDGDVFAW 145
Query: 577 V 579
+
Sbjct: 146 L 146
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 355 CLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVSWVSFQG 525
C+ DW A ++LSGS D L +W ++K L GH + + +V +
Sbjct: 47 CVNTLDW----SADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSN 102
Query: 526 DQATFVSGSHDQ 561
++ +S S D+
Sbjct: 103 NR-QILSASGDK 113
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 651 QAFNSLVVATVSDHTVNRISRYIPY 577
Q+ +++V T + T N +S+Y+PY
Sbjct: 79 QSIENMIVTTKAGQTENALSKYLPY 103
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
VS H+++ + HI+ K H G +P KAV ++ Q D+ T + G++
Sbjct: 3 VSTQTRHATYFQDENQLQKDHIYVKKKSHIKLNTGVRAPFKAVDNIN-QQDEPTLIEGNN 61
Query: 556 DQT 564
+ +
Sbjct: 62 ESS 64
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 373 WVSAVQAHSSWILSGSYDNSLHIWSTK 453
W + S+ ++SG+ DN++ +W K
Sbjct: 56 WTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 403 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 510
+I+SG L + ST+ G+ + GHTSPV++V++
Sbjct: 159 FIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAF 195
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.6 bits (56), Expect = 3.3
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
Frame = +1
Query: 388 QAHSSWI-LSGSYDNSLHIWS---TKGQHKLAIP----GHTS----PVKAVSWVSFQGDQ 531
Q SS I L+ YD++ IW TK Q ++ + HT PV + +W + D
Sbjct: 206 QPDSSQIFLTTGYDSTARIWDVNRTKSQLEVFVHVPEGSHTGLSRIPVTSCAWNPAKPDN 265
Query: 532 ATFVSGSHDQTAILWVWNVPRNSVDCMITYRGH--DKGIECLSVSADGN 672
F + D + W R M H +GI CLS S DGN
Sbjct: 266 --FATAVLDGSIQFWQKG-SRTKRPVMKIKDAHLPQQGISCLSFSQDGN 311
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 552
+++ +GS D ++ ++ Q + +I S V + W+SF + V GS
Sbjct: 318 TYLAAGSADGTITLFDQLKQTQYSIDTLASSVLDIEWISFDEFVTSDVEGS 368
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW 444
H V A+ ++++SGS+D+S+ +W
Sbjct: 659 HHSEVWALAVGPTFVVSGSHDHSIRLW 685
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 228 FLSMWRVTLCLPRRALTRKRGID 296
F+ + T+C P R LT RG+D
Sbjct: 450 FIQVANETMCRPIRKLTESRGLD 472
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 5.7
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +1
Query: 247 LLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQA-HSSWILSGSY 423
LL + L+E+G +T DT + L R +C+ D + VQ+ W+L+
Sbjct: 343 LLLNEIQPELEEQGYTTLDTQKYRVLSRQNGVVRSNCMDCLDRTNVVQSCIGRWVLT--- 399
Query: 424 DNSLHIWSTKGQHKLAIPGHTSPVKAV-----SWVSFQGDQATFVSGSHDQTAIL 573
N L K I G T P+++V + + D A ++S S+ T L
Sbjct: 400 -NQL--------RKCGIIGATHPLRSVIPLDNIFCNIWSDNADYISLSYSGTGAL 445
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 526 DQATFVSGSHDQTAILWVWNVPRNSVDCM 612
D+ V+GS D T LW+ N+P NSV +
Sbjct: 115 DRRIVVTGSWDGTIKLWLGNLP-NSVQTL 142
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +1
Query: 304 TLEVEYLERFPAPTPQDCL----MHDDWVSAVQ----AHSSWILSGSYDNSLHIWS 447
T + R P C+ +H ++V V SWI S +D SL+IW+
Sbjct: 251 TASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGWDESLYIWN 306
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 403 NYCVPEQLTPNHRALNSPVELVQGTFPSIRPQACP 299
+YC PE L+ NH P Q P RP P
Sbjct: 145 SYCRPEPLSSNHVRSCPPFPPTQHHHPHTRPPHHP 179
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWSTKGQH 462
V +H+ +GS + S+ IW T GQ+
Sbjct: 1229 VHSHAPVYATGSSNQSIKIWDTLGQN 1254
>SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 479 PGMASLCCPFVLHICKLLS*LPDRI 405
PG+ + C VL IC LS LP++I
Sbjct: 154 PGLIATCMDEVLAICSFLS-LPNKI 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,882,396
Number of Sequences: 5004
Number of extensions: 60431
Number of successful extensions: 307
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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