Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30648
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein.      31   5.1  
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papillo...    31   5.1  
AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papillo...    31   5.1  
AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein.             31   5.1  
AK124505-1|BAC85867.1|  215|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AK128759-1|BAC87603.1|  140|Homo sapiens protein ( Homo sapiens ...    25   7.4  

>BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein.
          Length = 1803

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 430  LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLHSNA 278
            +S + P +R +P S  L  Q  +V L+P  +  SD  Y +H     L SNA
Sbjct: 1245 VSKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1294


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 20  LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC 118
           + +S+D  KAF+++ HR +L  L   GI EG C
Sbjct: 26  MIISIDAEKAFNKIQHRFMLKTLNKLGI-EGPC 57


>AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papilloma
            viruses E6 oncoproteins targeted protein E6TP1 beta
            protein.
          Length = 1804

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 430  LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLHSNA 278
            +S + P +R +P S  L  Q  +V L+P  +  SD  Y +H     L SNA
Sbjct: 1245 VSKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1294


>AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papilloma
            viruses E6 oncoproteins targeted protein E6TP1 alpha
            protein.
          Length = 1783

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 430  LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLHSNA 278
            +S + P +R +P S  L  Q  +V L+P  +  SD  Y +H     L SNA
Sbjct: 1224 VSKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1273


>AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein.
          Length = 1817

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 430  LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLHSNA 278
            +S + P +R +P S  L  Q  +V L+P  +  SD  Y +H     L SNA
Sbjct: 1259 VSKVLPAFRESP-SGRLMRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNA 1308


>AK124505-1|BAC85867.1|  215|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42514 fis, clone BRACE2047350. ).
          Length = 215

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +2

Query: 518 PCNLPRVSGYLGSTFRAMSSFGVIWKAKPSWRPKCWESSTERSG 649
           PC   R S   G+  RA  S  V   A+P  RP C ES   R+G
Sbjct: 17  PCLDDRCSELSGALPRAQRSRAVPIPARPRKRPSCRESGKPRAG 60


>AK128759-1|BAC87603.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45035 fis, clone BRAWH3019594. ).
          Length = 140

 Score = 25.0 bits (52), Expect(2) = 7.4
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 570 CPVSESFGRQSQV 608
           CPVSE+FGR S V
Sbjct: 96  CPVSETFGRLSPV 108



 Score = 23.8 bits (49), Expect(2) = 7.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 543 DTWGRHFERCPVSESFGR 596
           +T+GR    CPVSE+FGR
Sbjct: 70  ETFGR---LCPVSETFGR 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,348,345
Number of Sequences: 237096
Number of extensions: 2756120
Number of successful extensions: 6477
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6477
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)