Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30648
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    48   8e-06
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    47   1e-05
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    40   0.001
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    36   0.036
AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical ...    31   0.77 
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical...    29   3.1  
AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical...    29   3.1  
AF016443-7|AAK68184.1|  285|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF016443-6|AAK68185.1|  257|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z70210-1|CAA94149.1|  176|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF440520-1|AAL34108.1|  172|Caenorhabditis elegans SKR-21 protein.     28   7.2  
AF100656-1|AAZ91351.1|  111|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z81124-10|CAH60752.1|  241|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z66498-3|CAA91293.2|  687|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
 Frame = +1

Query: 136  LDGRSITVVVDGDCS-DTMTINAGVPQGSVLSPTLFILYINDMLSID-----GMHCYADD 297
            L+ R+ +V ++   S ++  I++GVPQGSV  P LFIL+IN++L ID      + C+ADD
Sbjct: 857  LENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLL-IDLAPTINISCFADD 915

Query: 298  STGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAF-TA 474
                   I H                + ++NS+  +  W + N +   P K+ + A  T 
Sbjct: 916  VK-----IFHTD-------------PTIIQNSIDIIVSWSKLNELPLAPTKSALLALGTR 957

Query: 475  KKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHL 591
             K+    +    GV + PS ++  LG+     ++F  H+
Sbjct: 958  NKN---QSYSVDGVPITPSSTVRDLGLITDCKLKFEHHI 993


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
 Frame = +1

Query: 136 LDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSI--DGMHC--YADDST 303
           L  RS  V +    S       GVPQG+VLSP LF +Y+ND+ SI  + + C  +ADD  
Sbjct: 54  LSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADD-- 111

Query: 304 GDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 483
                      ++      +++  + ++++L  V  W + + +  N  KT     T  K 
Sbjct: 112 -----------TKLYASTPKTESENNLQSALDAVVDWTKGSKLTLNQSKT--VHVTVGKR 158

Query: 484 PFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPG 663
                    G  ++       LG  IS  + F  H      LA   L   N   +Y T  
Sbjct: 159 RIDFKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLA--NMFNKYSTSN 216

Query: 664 QRL--LLYK 684
           ++L  LLYK
Sbjct: 217 KKLMILLYK 225



 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASF 136
           + LD +KAFDR+ H  LL KL S    + L  W+  F
Sbjct: 17  IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEF 53


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 136 LDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGD 309
           L  R I    D   S   T+  GVPQGSV+SP LF  Y+ DM +     +  YADD +  
Sbjct: 510 LHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSII 569

Query: 310 AR 315
           AR
Sbjct: 570 AR 571


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 136 LDGRSITVVVDGDCSDTM-TINAGVPQGSVLSPTLFILYINDML 264
           L  R+ +V V+      +  I++GVP+GSV  P LF+++IN +L
Sbjct: 33  LSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLL 76



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 44  KAFDRVWHRALLSKLPSYGIPEGLCKWIASF 136
           KAFD+V H  LL KL  +GI    C W   F
Sbjct: 2   KAFDQVNHSLLLQKLHDFGINPLFCNWFHDF 32


>AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.8 protein.
          Length = 390

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 260 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 174
           +SL    KS GE T+PCGTP    + SE+
Sbjct: 50  ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = -3

Query: 311  ASPVLSSA*QCMPSIDS-MSLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVMLRPSK 135
            +SP+ S++    PS  S  S+  +     +ST P  +       S  SP TT   + PS 
Sbjct: 966  SSPIPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSP 1025

Query: 134  S*RSTCRDPRGFRKMVTS 81
            S  ST    +G    V S
Sbjct: 1026 SPSSTIGSSQGSTSPVVS 1043


>Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical
           protein T10G3.2 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -3

Query: 368 FDRLSCTTLRERL*WPIYRASPVLSSA*QCMPSIDSMSLIYRMKSVGESTEPCGTPA 198
           F ++ C +LR R   P+ R+ P+  S      S+ ++  ++ M   GE+  P G  A
Sbjct: 283 FSQMCCNSLRRR---PVRRSHPISPSPGTSPSSVVTIQNVFGMTLSGEANGPAGQEA 336


>AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18b protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 179 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMACIAMQMIAR 304
           L+P P+TL F ++ C P  F+  +    C +  C  +  I +
Sbjct: 17  LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 58


>AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18a protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 179 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMACIAMQMIAR 304
           L+P P+TL F ++ C P  F+  +    C +  C  +  I +
Sbjct: 90  LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 131


>AF016443-7|AAK68184.1|  285|Caenorhabditis elegans Hypothetical
           protein C17E7.9a protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 40  REGLRQGLA*GTSIEVTILRNPR 108
           RE + +GLA GT +  T+ R PR
Sbjct: 246 RENVHEGLADGTQVTTTVFRGPR 268


>AF016443-6|AAK68185.1|  257|Caenorhabditis elegans Hypothetical
           protein C17E7.9b protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 40  REGLRQGLA*GTSIEVTILRNPR 108
           RE + +GLA GT +  T+ R PR
Sbjct: 218 RENVHEGLADGTQVTTTVFRGPR 240


>Z70210-1|CAA94149.1|  176|Caenorhabditis elegans Hypothetical
           protein K08H2.1 protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 421 SNLVQFNPLKTQVCAFTAKK 480
           +NLVQ +PLKT +C+F   K
Sbjct: 41  NNLVQPHPLKTSICSFVLVK 60


>AF440520-1|AAL34108.1|  172|Caenorhabditis elegans SKR-21 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 421 SNLVQFNPLKTQVCAFTAKK 480
           +NLVQ +PLKT +C+F   K
Sbjct: 37  NNLVQPHPLKTSICSFVLVK 56


>AF100656-1|AAZ91351.1|  111|Caenorhabditis elegans Hypothetical
           protein F49F1.14 protein.
          Length = 111

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +2

Query: 155 RSL*TVTVLIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMACIAMQMIARGMRDISAIRV 334
           RSL T   ++P    L      C  P   S + + CCLL   + + +IA  +  +     
Sbjct: 19  RSLRTGKRVVPGQYVLDEPDTLCVLP---SSMRIVCCLLTLLLILSLIAAILNSLQGSSN 75

Query: 335 SLGAWCKRDDQ 367
              ++CKR D+
Sbjct: 76  GSVSYCKRPDE 86


>AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.6 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 48  PSTGSGIGHFYRSYHLTESPRVSASGSLAFGW 143
           P  G   G        TE P++ +S SL+FGW
Sbjct: 194 PGEGDDNGESSEQKTGTEKPKLESSNSLSFGW 225


>Z81124-10|CAH60752.1|  241|Caenorhabditis elegans Hypothetical
           protein T21B4.15 protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 274 GMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSKWGESNLVQFNPL 447
           G H     S      +  + L +SV QE+  +L   + NS  R ++  ++ L+   P+
Sbjct: 134 GSHSEGLLSIAQPNQVDEEQLKQSVAQEKLEELTMRIGNSYHRATQKRQTILIDIAPM 191


>Z66498-3|CAA91293.2|  687|Caenorhabditis elegans Hypothetical
           protein M195.3 protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = -1

Query: 511 LGIAAP*QRGPSSQ*TRKPVSSTG*IELSSIHPIWRLAPESSPLQTQVLIVSLAPRSERD 332
           + I A  ++ PSS  +R+ +S      + ++  I   AP+S P       +     S+  
Sbjct: 605 VSIEASVEKSPSSSTSRRSISIRSSPSIHTVSAISTAAPDSRPSTASATSIISKKSSKNS 664

Query: 331 SDGRYIAHP 305
           + G+++  P
Sbjct: 665 TVGKFVKAP 673


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,575
Number of Sequences: 27780
Number of extensions: 407410
Number of successful extensions: 1186
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)