Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30648
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    26   0.29 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    26   0.29 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.68 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.68 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.3  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 430 LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 323
           LS +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 12  LSIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 430 LSSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 323
           LS +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 12  LSIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -2

Query: 540 DTLGRLQGYSLELRRHDKGVLLRSERANLCLQRVELN*VRFTPFGDSPQR--VLHFR 376
           D   +L+G    +  +D+GV  ++   N+       + V+F   GD   R  +L+FR
Sbjct: 350 DVCSKLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -2

Query: 540 DTLGRLQGYSLELRRHDKGVLLRSERANLCLQRVELN*VRFTPFGDSPQR--VLHFR 376
           D   +L+G    +  +D+GV  ++   N+       + V+F   GD   R  +L+FR
Sbjct: 440 DVCSKLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 294 ICIAMHAINRQHVIDIQDEK 235
           IC+A   IN+Q + D+ D K
Sbjct: 32  ICMAKTGINKQIINDVNDGK 51


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = +2

Query: 599 KPSWRPKCWESSTERSGTSR 658
           +P+W+   W+   ++  TS+
Sbjct: 419 EPAWKTHVWKKGRDKKSTSK 438


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 308 SPVLSSA*QCMPSIDSMSLI 249
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 352 QERRSKLVSEVENSLGRVSKW 414
           QER S+LV  +EN    V  W
Sbjct: 465 QERESELVPYLENKGNGVYAW 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,838
Number of Sequences: 438
Number of extensions: 4782
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)