Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30632
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X61100-1|CAA43412.1|  727|Homo sapiens 75 kDa subunit NADH dehyd...    42   0.001
BC030833-1|AAH30833.1|  727|Homo sapiens NADH dehydrogenase (ubi...    42   0.002
BC022368-1|AAH22368.1|  727|Homo sapiens NADH dehydrogenase (ubi...    42   0.002
BC012068-1|AAH12068.1|  255|Homo sapiens NDUFS1 protein protein.       42   0.002
AC007383-1|AAY15061.1|  727|Homo sapiens unknown protein.              42   0.002

>X61100-1|CAA43412.1|  727|Homo sapiens 75 kDa subunit NADH
           dehydrogenase  precursor protein.
          Length = 727

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 18/30 (60%), Positives = 25/30 (83%)
 Frame = +1

Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
           L+D++MTD ISRAS TMAKC++AV +  Q+
Sbjct: 691 LKDFYMTDSISRASQTMAKCVKAVTEGAQA 720


>BC030833-1|AAH30833.1|  727|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
           reductas protein.
          Length = 727

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +1

Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
           ++D++MTD ISRAS TMAKC++AV +  Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720


>BC022368-1|AAH22368.1|  727|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
           reductas protein.
          Length = 727

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +1

Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
           ++D++MTD ISRAS TMAKC++AV +  Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720


>BC012068-1|AAH12068.1|  255|Homo sapiens NDUFS1 protein protein.
          Length = 255

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +1

Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
           ++D++MTD ISRAS TMAKC++AV +  Q+
Sbjct: 219 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 248


>AC007383-1|AAY15061.1|  727|Homo sapiens unknown protein.
          Length = 727

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +1

Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
           ++D++MTD ISRAS TMAKC++AV +  Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,883,897
Number of Sequences: 237096
Number of extensions: 2431826
Number of successful extensions: 3882
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3882
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)