Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30630
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 316 5e-87
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 34 0.074
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 33 0.13
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.69
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.69
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 28 3.7
Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical ... 28 4.8
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 27 6.4
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical ... 27 6.4
AC006632-5|AAK85474.1| 202|Caenorhabditis elegans Hypothetical ... 27 6.4
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 27 8.5
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 27 8.5
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 27 8.5
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 27 8.5
AC006816-4|AAK85507.1| 239|Caenorhabditis elegans Smn (survival... 27 8.5
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 316 bits (777), Expect = 5e-87
Identities = 143/178 (80%), Positives = 166/178 (93%)
Frame = +2
Query: 2 KKLAQRKHFPSINWLISYSKYMRALDDFYEKNYPEFVPLRTKVKEILQEEEDLSEIVQLV 181
KKLAQRKHFPSINWLISYS+YMRAL++FYEKNYPEFV LRTK KEILQEEEDLSEIVQLV
Sbjct: 426 KKLAQRKHFPSINWLISYSEYMRALEEFYEKNYPEFVSLRTKCKEILQEEEDLSEIVQLV 485
Query: 182 GKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVE 361
GKASLAE+DK+TLEVAK++KDDFLQQN Y+ YDRFCPFYKTVGMLKN+I FYD++RHAVE
Sbjct: 486 GKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGFYDLARHAVE 545
Query: 362 STAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLEDMSAAFRN 535
+TAQSDNK+TWNVI+D+MG+++YQLS+MKFKDPV DGE KI+ D++ L E M+ AFRN
Sbjct: 546 ATAQSDNKITWNVIKDSMGDLIYQLSAMKFKDPVADGEAKIRKDYEDLAEAMANAFRN 603
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 307 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 417
GH EHHH H G H A GH H HG
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +1
Query: 307 GHAEEHHHVLRHVAARG-----GVH-GAVRQQGHVERHPRRHGQRALPALLHEVQG 456
GH EHHH H G GVH G GH P HG + H G
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 307 GHAEEHHHVLRHVAARG--GVHGAVRQQGHVERHPRRHGQ 420
GH EHHH H G G H H H HG+
Sbjct: 527 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 566
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 307 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 417
GH EHHH H HG GH P HG
Sbjct: 427 GHHGEHHHAPAH-------HGHHESHGHGHHSPAHHG 456
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 310 HAEEHH--HVLRHVAARGGVHGAVRQQGHVERHPRRHGQRALPA 435
H + HH H + H G H ++ GH H HG PA
Sbjct: 643 HGDHHHGSHGVHH--GHHGTHHSLAHHGHHGGHGTHHGAHHSPA 684
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +2
Query: 128 VKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQ 259
V++ILQ+ + L +I+ ++G L+E DK+T+ A+ ++ FL Q
Sbjct: 433 VQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ-RFLSQ 475
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 307 GHAEEHHHVLRHVAAR-GGVHGAVRQQGHVERHPRRHG 417
GH + HHH H GG HG + H E H HG
Sbjct: 44 GHVDTHHHEESHHGEHHGGHHGVQHYESHHESH--HHG 79
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.7 bits (66), Expect = 0.69
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +1
Query: 169 RAAGRQGVPRGN*QDHARGRQAAQRRLPATEQLFVVRSLLPVLQDGGHAEEHHHVLRHVA 348
R R G P G H G + P RS P GH H H
Sbjct: 339 RHGSRSGSPGGR---HGHGGRHGPPHCPGRHGRHGSRSHSP----RGHGHGGRHGPPHCP 391
Query: 349 ARGGVHGAVRQQGHVERHPRRHG 417
R G HG H R P RHG
Sbjct: 392 GRHGHHGPPHHHHHDGRSPSRHG 414
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 355 GGVHGAVRQQGHVERHPRRHGQR 423
GG+HGA +QQ V + P H Q+
Sbjct: 443 GGIHGAQQQQQAVRKRPDSHQQQ 465
>Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical
protein F08G5.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 224 VAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVT 391
VAK + + ++ YD F+ G L+N + Y M++ ++ NKVT
Sbjct: 165 VAKERMSISIAYSGWTPYDNLYNFFLIEGDLENPLAIYRMTQFLYQNYISKGNKVT 220
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 155 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 319
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 155 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 319
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical
protein Y47H9C.8 protein.
Length = 389
Score = 27.9 bits (59), Expect = 4.8
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +2
Query: 119 RTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQ--NSYSSYDRFCP 292
+ ++ L+E+ + S I L + L + + EV +++ D +++ + +
Sbjct: 25 QNSIRAALEEKLERSPIEDL--ELQLEQPEINVEEVGRIIADGIIEKTLDDEKLKELTLK 82
Query: 293 FYKTVGMLKNIITFYDMSRHAVESTAQS-----DNKVTWNVIRDAMGNVLYQLSSMKFK 454
F K V + NI + +++S T S N WN+++ +M ++ + + KFK
Sbjct: 83 FAKNVPTMANI-SIWNLSEELSTGTIDSRLVVIGNAFLWNLLKTSMSSIREKFENYKFK 140
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 180 SARRPSRKLTRSRSRSPSCSKTTS 251
S+ R SR +RSRSRS S S++TS
Sbjct: 62 SSARQSRSRSRSRSRSRSKSRSTS 85
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 307 GHAEEHHH--VLRHVAARGGVHGAVRQQGHVERHPRRHG 417
GH + HHH H GG HG + H E H HG
Sbjct: 45 GHMDTHHHHDSHHHGGHHGGHHGG-HYESHYESH-HHHG 81
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +1
Query: 301 DGGHA----EEHHHVLRHVAARGGVHGAVRQQGHVERHPRRH 414
DGGH HHH H GG HG GH E H H
Sbjct: 40 DGGHHGHMDTHHHHDSHH---HGGHHGG-HHGGHYESHYESH 77
>AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical
protein T23E1.1 protein.
Length = 566
Score = 27.5 bits (58), Expect = 6.4
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +2
Query: 53 YSKYMRALDDFYEKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAK 232
Y ++ L D Y K +PE + K + L +D++E ++ + + +T E +
Sbjct: 396 YGVFLIRLSDSYRKRFPENAEILKKNVDRLITNQDVAETLKHI--IYDQNQENVTFENSL 453
Query: 233 LLKDDFLQQNS--YSSYDRFCPFYK--TVGMLKNIITFYDMSRHAVESTAQSDNKVTWNV 400
L +++ ++ D FC K +G+ K ITF+ +T + + +
Sbjct: 454 LSRENSKSRSCDIAGIEDEFCICSKLAQIGIDKRSITFFKFFGFLTTATVKLEKGFS-KP 512
Query: 401 IRDAMGNVLYQLS----SMKFKDPVKDGEPKIKADFDQLLED 514
IR G LS ++ ++P+K E + D++ ++
Sbjct: 513 IRLKFGGKARFLSLEPDDLELREPLKFIESNHSLEMDRVSDN 554
>AC006632-5|AAK85474.1| 202|Caenorhabditis elegans Hypothetical
protein F28A10.8 protein.
Length = 202
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 230 KLLKDDFLQQNSYSSYDRFCPFYKTV 307
KL+KDD ++N + D+FCP + V
Sbjct: 144 KLIKDDIPRENGKWNDDQFCPLGQVV 169
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 332 FYDMSRHAVESTAQSDNKVTWNVIR 406
F+D+ A + T + +N+V WN+ +
Sbjct: 276 FFDLCEDAFDETVRRENEVNWNMTK 300
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 434 LSSMKFKDPVKDGEPKIKADFDQLLEDMSA 523
+ +++ KDP KD P+I A D+ + ++ A
Sbjct: 2171 IPALEIKDPKKDIPPEISASIDKTMAEVDA 2200
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 53 YSKYMRALDDFYEKNYPEFVPLRTKV---KEILQEEEDLSEIVQLVGKASLAETDKITLE 223
+ M A+D+ E E+VP+ KV K++L EEE + + ++ + +K+
Sbjct: 263 FEDVMTAIDESVEAYKKEYVPMYEKVLAEKKLLDEEERKKRDEETLKGKAVHDLNKVA-- 320
Query: 224 VAKLLKDDFLQQNSYSSYDR 283
D+FL+ S DR
Sbjct: 321 ----NPDEFLESELNSKIDR 336
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 53 YSKYMRALDDFYEKNYPEFVPLRTKV---KEILQEEEDLSEIVQLVGKASLAETDKITLE 223
+ M A+D+ E E+VP+ KV K++L EEE + + ++ + +K+
Sbjct: 263 FEDVMTAIDESVEAYKKEYVPMYEKVLAEKKLLDEEERKKRDEETLKGKAVHDLNKVA-- 320
Query: 224 VAKLLKDDFLQQNSYSSYDR 283
D+FL+ S DR
Sbjct: 321 ----NPDEFLESELNSKIDR 336
>AC006816-4|AAK85507.1| 239|Caenorhabditis elegans Smn (survival of
motor neuron protein)related protein 1, isoform a
protein.
Length = 239
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 134 EILQEEEDLSEIVQLVGKASLAETDK 211
E+L+ +EDL EI+ L + LAETDK
Sbjct: 27 ELLKLKEDLGEIISL--QEDLAETDK 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,008,778
Number of Sequences: 27780
Number of extensions: 169620
Number of successful extensions: 836
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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