Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30626
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1650|AAF58416.2|  685|Drosophila melanogaster CG33138-P...   197   7e-51

>AE013599-1650|AAF58416.2|  685|Drosophila melanogaster CG33138-PA
           protein.
          Length = 685

 Score =  197 bits (481), Expect = 7e-51
 Identities = 90/188 (47%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
 Frame = +1

Query: 28  DLEKLLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGSV 207
           D+EKL E DGYL+P+E EIRRR+   +D  ++I   +GGL+ F+  YK+YG  F  D SV
Sbjct: 6   DIEKLFETDGYLRPFEHEIRRRHGVLEDWLNKINQSEGGLDGFSTAYKHYGLHFQPDNSV 65

Query: 208 TWREWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIV 387
             REWAPGA  ++L G+FN W  +SHPF K ++GKWE+ +P N DGS A+KH S ++II+
Sbjct: 66  IAREWAPGARDVYLTGDFNNWHWESHPFKKLDFGKWELHLPPNEDGSPAIKHLSEIKIII 125

Query: 388 NDN----LYRISPWASYV-----KPHEGFTYQHFIYKPE--QPYKFKHPKVDKPKSLRIY 534
            ++    L R+SPWA YV       ++G  Y+ ++++P   + Y+ +HP   +PKSLRIY
Sbjct: 126 RNHSGQLLDRLSPWAKYVVQPPKSANQGVNYKQYVWEPPSYERYQRQHPGPPRPKSLRIY 185

Query: 535 ECHVGIAT 558
           ECHVGIA+
Sbjct: 186 ECHVGIAS 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,675,586
Number of Sequences: 53049
Number of extensions: 660738
Number of successful extensions: 1472
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)