Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30622
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA...    30   2.9  
AE014134-1243|AAF52488.1|  402|Drosophila melanogaster CG13783-P...    29   8.7  

>AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA
           protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +1

Query: 337 TLMEDLKSYYYT*NRKKDLPLLSQIVDVL*YTNDEGANTSITVTNNDFNFRL 492
           T+M+D+K +Y   +  +DL L ++   +  +T D G N+     N D++F L
Sbjct: 287 TMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYYLNMDYSFFL 338


>AE014134-1243|AAF52488.1|  402|Drosophila melanogaster CG13783-PA
           protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 264 VRSQSHRQQSLPTKDKDTFTPIFRNINGRFKIIL 365
           +R Q H+++ L  ++K   TP+ RNI     + L
Sbjct: 365 LRQQKHQKELLAMREKSRNTPLIRNIENEVSLAL 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,770,507
Number of Sequences: 53049
Number of extensions: 608398
Number of successful extensions: 1126
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)