Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30618
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060886-1|AAH60886.1|  729|Homo sapiens MYO9A protein protein.        31   3.0  
AJ001714-1|CAA04947.1|  774|Homo sapiens Myosin-IXA protein.           31   3.0  
AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein.           31   3.0  
AB209841-1|BAD93078.1| 1105|Homo sapiens myosin IXA variant prot...    31   3.0  

>BC060886-1|AAH60886.1|  729|Homo sapiens MYO9A protein protein.
          Length = 729

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 60  FLYQPKDREYPDLCQLPELN 1
           FL QP+ +++ DLC LP+LN
Sbjct: 139 FLPQPQQKDFDDLCSLPDLN 158


>AJ001714-1|CAA04947.1|  774|Homo sapiens Myosin-IXA protein.
          Length = 774

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 60  FLYQPKDREYPDLCQLPELN 1
           FL QP+ +++ DLC LP+LN
Sbjct: 139 FLPQPQQKDFDDLCSLPDLN 158


>AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein.
          Length = 2548

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 60  FLYQPKDREYPDLCQLPELN 1
           FL QP+ +++ DLC LP+LN
Sbjct: 139 FLPQPQQKDFDDLCSLPDLN 158


>AB209841-1|BAD93078.1| 1105|Homo sapiens myosin IXA variant
           protein.
          Length = 1105

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 60  FLYQPKDREYPDLCQLPELN 1
           FL QP+ +++ DLC LP+LN
Sbjct: 114 FLPQPQQKDFDDLCSLPDLN 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,326,909
Number of Sequences: 237096
Number of extensions: 1826997
Number of successful extensions: 7163
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7163
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)