Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30615
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.3  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 165 FTYYILRFALPTCQL 121
           F+YY+++  +P C L
Sbjct: 241 FSYYLIQIYIPCCML 255


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 165 FTYYILRFALPTCQL 121
           F+YY+++  +P C L
Sbjct: 241 FSYYLIQIYIPCCML 255


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 481 WIFTKNFFHFPP 516
           W  T NFF+F P
Sbjct: 210 WRITHNFFYFDP 221


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 TLLRFNGLPDS 445
           T+LR+NG+P S
Sbjct: 79  TMLRYNGVPSS 89


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 TLLRFNGLPDS 445
           T+LR+NG+P S
Sbjct: 79  TMLRYNGVPSS 89


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 TLLRFNGLPDS 445
           T+LR+NG+P S
Sbjct: 79  TMLRYNGVPSS 89


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 359 FALNDSFNTKRHGCHQRCTLLRFNGLPDS 445
           + +N   +T + G      +++FNG+P S
Sbjct: 59  YTMNYLLDTDQWGDKTFVIIMKFNGVPSS 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,150
Number of Sequences: 438
Number of extensions: 2685
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)