Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30605
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.7  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.8  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.8  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 625 IYSCGVTFILSIYESVCFKFVFSYSSEGFKCFWFP*SQ 512
           +YS G  F+L I+ +   +   S     + C W+  S+
Sbjct: 164 LYSLGQVFMLCIFGNRLIEESSSVMEAAYSCHWYDGSE 201


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 477 LI*CWIGNLCQTWLHGNQKHLK 542
           LI   +GN C  W+    K L+
Sbjct: 68  LIMSLVGNCCVIWIFSTSKSLR 89


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 428 EQHNITLFSLREGLDRANIMLDRKSL 505
           E HN + FS+   L+R N++    SL
Sbjct: 469 ELHNSSPFSIYSFLERLNLIFMSSSL 494


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 428 EQHNITLFSLREGLDRANIMLDRKSL 505
           E HN + FS+   L+R N++    SL
Sbjct: 507 ELHNSSPFSIYSFLERLNLIFMSSSL 532


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 477 LI*CWIGNLCQTWLHGNQKHLK 542
           LI   +GN C  W+    K L+
Sbjct: 68  LIMSLVGNCCVIWIFSTSKSLR 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,239
Number of Sequences: 438
Number of extensions: 4068
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)