Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30604
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein. 75 2e-13
AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for S... 75 2e-13
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S... 75 2e-13
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S... 75 2e-13
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S... 75 2e-13
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S... 75 2e-13
AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein. 75 2e-13
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int... 75 2e-13
AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional co-acti... 75 2e-13
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein. 75 2e-13
>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
Length = 1359
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 886
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 769 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 828
Query: 179 IQSNLD 196
+++ D
Sbjct: 829 VRTFAD 834
>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1368
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1374
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 769 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 828
Query: 179 IQSNLD 196
+++ D
Sbjct: 829 VRTFAD 834
>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1364
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1365
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 769 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 828
Query: 179 IQSNLD 196
+++ D
Sbjct: 829 VRTFAD 834
>AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.
Length = 1364
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 1368
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional co-activator
CRSP130 protein.
Length = 936
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 819 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 878
Query: 179 IQSNLD 196
+++ D
Sbjct: 879 VRTFAD 884
>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
Length = 1421
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 816 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 875
Query: 179 IQSNLD 196
+++ D
Sbjct: 876 VRTFAD 881
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,948,045
Number of Sequences: 237096
Number of extensions: 1902265
Number of successful extensions: 2614
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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