Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30604
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z75545-6|CAA99888.3|  649|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL008986-2|CAA15621.3|  649|Caenorhabditis elegans Hypothetical ...    29   3.9  

>Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical
           protein F53F8.1 protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +2

Query: 377 SSFIYLYYLGGTNDKTNYKFNICYFMTHS*LSGNFLPLF 493
           SSF+Y  +LGG   K+  KF++CY    S  SG   PLF
Sbjct: 8   SSFLYFLFLGGK--KSLLKFSVCYH--RSDRSGVTTPLF 42


>Z75545-6|CAA99888.3|  649|Caenorhabditis elegans Hypothetical
           protein H37N21.1 protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 152 IIFEITVIYIQSNLDKRELDK*ENSISESNSQGPSL*APKTSISEKQKPL*ERVVSPSWT 331
           + F+I    I   + + E    E S  ESNS+ P      +SI+   KP+ + V   S T
Sbjct: 586 VAFDIRAARIAEGVQEEEN---ETSTRESNSEAPIENGTSSSITNSVKPIVDSVAPSSQT 642

Query: 332 SVSETAT 352
             + T++
Sbjct: 643 PTTTTSS 649


>U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK563.7 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 323 SWTSVSETATYLYLYKRQSSFIYLYYLGGTNDKTNYKFN 439
           SW S        +   R +SFI+  +LGG N  +N+ FN
Sbjct: 20  SWYSTLRYGALAFSQNRTASFIH--WLGGVNITSNFNFN 56


>AL008986-2|CAA15621.3|  649|Caenorhabditis elegans Hypothetical
           protein H37N21.1 protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 152 IIFEITVIYIQSNLDKRELDK*ENSISESNSQGPSL*APKTSISEKQKPL*ERVVSPSWT 331
           + F+I    I   + + E    E S  ESNS+ P      +SI+   KP+ + V   S T
Sbjct: 586 VAFDIRAARIAEGVQEEEN---ETSTRESNSEAPIENGTSSSITNSVKPIVDSVAPSSQT 642

Query: 332 SVSETAT 352
             + T++
Sbjct: 643 PTTTTSS 649


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,942,121
Number of Sequences: 27780
Number of extensions: 307303
Number of successful extensions: 597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)