Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30602
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   301   5e-84
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   301   5e-84
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.5  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  301 bits (738), Expect = 5e-84
 Identities = 139/177 (78%), Positives = 154/177 (87%)
 Frame = +3

Query: 135 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 314
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 315 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 494
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF     
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 495 XXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 665
                  TSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ GLYR
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177



 Score = 37.9 bits (84), Expect = 9e-05
 Identities = 36/162 (22%), Positives = 64/162 (39%)
 Frame = +3

Query: 162 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 341
           F  +  +GG + A S   V P++  +  L    V K    ++ + G+ +   +I K  G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172

Query: 342 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTS 521
              +RG   +V      +A  F F D  + +      KKT F   +             S
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKTPFLISWGIAQVVTTVAGIVS 230

Query: 522 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 647
               YP D  R R+    G+   +  +    +C + I+K++G
Sbjct: 231 ----YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 222 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 380
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  301 bits (738), Expect = 5e-84
 Identities = 139/177 (78%), Positives = 154/177 (87%)
 Frame = +3

Query: 135 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 314
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 315 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 494
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF     
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 495 XXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 665
                  TSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ GLYR
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177



 Score = 37.9 bits (84), Expect = 9e-05
 Identities = 36/162 (22%), Positives = 64/162 (39%)
 Frame = +3

Query: 162 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 341
           F  +  +GG + A S   V P++  +  L    V K    ++ + G+ +   +I K  G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172

Query: 342 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTS 521
              +RG   +V      +A  F F D  + +      KKT F   +             S
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKTPFLISWGIAQVVTTVAGIVS 230

Query: 522 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 647
               YP D  R R+    G+   +  +    +C + I+K++G
Sbjct: 231 ----YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 222 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 380
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 605 GEFTLAISLTDIGGKTGTCEVKGV 534
           G++ +  +    GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 605 GEFTLAISLTDIGGKTGTCEVKGV 534
           G++ +  +    GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 401 ERLGREVPDDVGEVTTPE 348
           ER  RE+PDD+ +   P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 401 ERLGREVPDDVGEVTTPE 348
           ER  RE+PDD+ +   P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,696
Number of Sequences: 438
Number of extensions: 3771
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)