Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30601
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p pro... 188 6e-48
AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA... 188 6e-48
U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein. 185 7e-47
AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p pro... 93 5e-19
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 33 0.33
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 33 0.58
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 32 0.76
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 32 0.76
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 32 0.76
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 31 1.3
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 31 1.3
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 31 1.3
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 31 1.3
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 31 1.3
BT023107-1|AAY55523.1| 396|Drosophila melanogaster IP10876p pro... 29 9.4
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro... 29 9.4
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA... 29 9.4
>AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p
protein.
Length = 213
Score = 188 bits (459), Expect = 6e-48
Identities = 102/201 (50%), Positives = 132/201 (65%)
Frame = +3
Query: 45 LRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN 224
LR ++T + ++R S EK E + K AT E ++E LT E+ + KEQ ++
Sbjct: 19 LRSSVTSQNMS-ALRLYSTEKQPEEATEQK--AT--ESSPEVEKLTKELAAAKEQNAELM 73
Query: 225 DKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXXXXXXXXXXX 404
DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADTL
Sbjct: 74 DKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTL--GHATQAVPKDKLSGN 131
Query: 405 XXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAV 584
L+ L++G+ +TRA L QVF RHGL P+ P+ +KFDPN HEALFQ+E + E TVV V
Sbjct: 132 ADLKNLYEGLTMTRASLLQVFKRHGLKPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEV 191
Query: 585 SKVGYKLHERCVRPALVGVAK 647
+K+GYKLHERC+RPALVGV+K
Sbjct: 192 TKLGYKLHERCIRPALVGVSK 212
>AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA
protein.
Length = 213
Score = 188 bits (459), Expect = 6e-48
Identities = 102/201 (50%), Positives = 132/201 (65%)
Frame = +3
Query: 45 LRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN 224
LR ++T + ++R S EK E + K AT E ++E LT E+ + KEQ ++
Sbjct: 19 LRSSVTSQNMS-ALRLYSTEKQPEEATEQK--AT--ESSPEVEKLTKELAAAKEQNAELM 73
Query: 225 DKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXXXXXXXXXXX 404
DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADTL
Sbjct: 74 DKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTL--GHATQAVPKDKLSGN 131
Query: 405 XXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAV 584
L+ L++G+ +TRA L QVF RHGL P+ P+ +KFDPN HEALFQ+E + E TVV V
Sbjct: 132 ADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEV 191
Query: 585 SKVGYKLHERCVRPALVGVAK 647
+K+GYKLHERC+RPALVGV+K
Sbjct: 192 TKLGYKLHERCIRPALVGVSK 212
>U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein.
Length = 213
Score = 185 bits (450), Expect = 7e-47
Identities = 101/201 (50%), Positives = 131/201 (65%)
Frame = +3
Query: 45 LRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN 224
LR ++T + ++R S EK E + K AT E ++E LT E+ + KEQ ++
Sbjct: 19 LRSSVTSQNMS-ALRLYSTEKQPEEATEQK--AT--ESSPELEKLTKELAAAKEQNAELM 73
Query: 225 DKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXXXXXXXXXXX 404
DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADTL
Sbjct: 74 DKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTL--GHATQAVPKDKLSGN 131
Query: 405 XXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAV 584
L+ L++G+ +TRA L QVF RHGL + P+ +KFDPN HEALFQ+E + E TVV V
Sbjct: 132 TDLKNLYEGLTMTRASLLQVFKRHGLESLDPINQKFDPNQHEALFQKEDKTVEPNTVVEV 191
Query: 585 SKVGYKLHERCVRPALVGVAK 647
+K+GYKLHERC+RPALVGV+K
Sbjct: 192 TKLGYKLHERCIRPALVGVSK 212
>AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p
protein.
Length = 183
Score = 92.7 bits (220), Expect = 5e-19
Identities = 52/103 (50%), Positives = 68/103 (66%)
Frame = +3
Query: 45 LRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN 224
LR ++T + ++R S EK E + K AT E ++E LT E+ + KEQ ++
Sbjct: 19 LRSSVTSQNMS-ALRLYSTEKQPEEATEQK--AT--ESSPEVEKLTKELATAKEQNAELM 73
Query: 225 DKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTL 353
DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADTL
Sbjct: 74 DKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTL 116
Score = 62.5 bits (145), Expect = 6e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 522 LHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVAK 647
L EALFQ+E + E TVV V+K+GYKLHERC+RPALVGV+K
Sbjct: 141 LTEALFQKEDKTVEPKTVVEVTKLGYKLHERCIRPALVGVSK 182
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 120 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 251
E ND L +++ K+ N + ++N++N KY +ALAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQALAD 169
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 32.7 bits (71), Expect = 0.58
Identities = 18/79 (22%), Positives = 42/79 (53%)
Frame = +3
Query: 9 FGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNE 188
+G++ + +A + + +K+ AL+A K + ++L IEE ++Q+E TN
Sbjct: 2951 YGKVYRIVAPKQEKLDSAMKSLEEKQAALAAAK----KKLEELQVVIEELYRQLEEKTNL 3006
Query: 189 VNSIKEQFNDINDKYKRAL 245
+N ++ + + + +RA+
Sbjct: 3007 LNELRAKEERLRKQLERAI 3025
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 120 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 251
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 120 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 251
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 120 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 251
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 141 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 317
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 141 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 317
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 886 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 943
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 141 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 317
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 911 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 968
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 141 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 317
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +3
Query: 141 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 317
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 924 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 981
>BT023107-1|AAY55523.1| 396|Drosophila melanogaster IP10876p
protein.
Length = 396
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 57 LTIKTFRPSVRALSAEKPAESESNDKLPATIEEC 158
L + T+ P LS E E++DKL IEEC
Sbjct: 347 LFLSTYLPMSVGLSLETATNEETDDKLQDFIEEC 380
>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p protein.
Length = 1489
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 105 KPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALA 248
K SES +L ATI +Q+++ I+E+ N Y +A
Sbjct: 1011 KAQNSESETQLQATISNLREQLDAYKQTEQGIQEKLQATNSSYTTQIA 1058
>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
protein.
Length = 1489
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 105 KPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALA 248
K SES +L ATI +Q+++ I+E+ N Y +A
Sbjct: 1011 KAQNSESETQLQATISNLREQLDAYKQTEQGIQEKLQATNSSYTTQIA 1058
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,961,597
Number of Sequences: 53049
Number of extensions: 607307
Number of successful extensions: 2074
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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